Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2746 |
Symbol | |
ID | 6462632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2833293 |
End bp | 2835410 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642728902 |
Product | short chain dehydrogenase |
Protein accession | YP_002019517 |
Protein GI | 194337723 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only [S] Function unknown |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [COG3347] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACC TCTGGAAAGA TGCCGATCTT CAGCGCTCCG TAACCGCGCA GCGCAGCACC GACGATATTC CTGTTGAACT TGCCGAACTT GTCTACGCCT CCCGTCTGCT CGGCAGCGAG AGTTCGCTGG TGATGCACGG CGGAGGCAAC ACCTCGGTCA AAAGCGAGCT GCACGATATC ATCGGCTACA GGGTCAATGT CATTTTCATC AAGGGGAGCG GCGTCAATCT GGCGGGTGTG GATGCGCACG ATTTTATGCC GGTACGGATC GAGCCACTGC AGAAGCTGCA ACATCTCTAC GCTACCGGCG GGCGCAGCAG CGAGGAGGAT ATACAGCAGT TCTCGACGCA ACGGTTCAAA AACTTCCTCT ATCTGAACCT GTTCTACCTG ACCGAGCACA TGGTGAACCA TTCGCTTTCA CCTTCGATTG AAACCCTGCT GCACGTGTTT CTGCCCCACC GGTTCATTTT CCATACGCAC TCCACGGCGC TTCTGACGCT CAGCAACCAG CCCGACGGCC AGGATCTCTG CCGGGAGGTG CTCGGAGAAT CGTTCGGCAT GGTGCCCTAT ATCAAGCCGG GTCTCGGGCT TGCCCGTTCG GCCGCTGCGG CCTACGAATC GGCTCCCTCC ATCAGAGGCC TTGTGCTGCA GAAGCACGGG CTCGTTACCT TTGCCGATAC TCCGGATGAG GCGTACCATT GCATGATCGA AAGCGCAAAT CGTCTGGAAG AGCGCATAGC CCGGGCCGGA CGGAAGGTGT TCCCTTCGGT TTCGCTTCCC GCCGGGATCG CATCCCTCGA GGATGTCGCG CCGGTTATCA GAGGGGCTGT CGTTGAAGAG ATCATGCCCG GAAGCCGCGA TTACCGTCAG TTCGTGCTCG AATTCCGTAC TTCACCCGAT ATTCTTGCCT ATGTCAACAG CGATTCTCTT TCCGATGTAA GCCAGAGAGG CGCCATGACC CCGGATTTCA TTATCCGCAC CAAAAACCGG CCGCTGGTCG TTCCGGCACC CGATGCCTCT GACCTCGACG CTTTCAAAAC GGCGATTCAT GAAGCGGTGG AGCAATACGA AGCGGAGTAC AGGGCTTATT TCCTGCGCCG GCGGCTGGCT TCGGGAATCG AGGTTTCCAT GCTCGACCCG CTGCCCAGGG TGGTGCTTGT GCCCGGTCTC GGTCTGTTCG GTCTCGGTCG GACCGCCCGG GAGGCTGCAG TCAACGCGGA TATCGCCGAA AGCACGGCAT CGGCCATTCT CGACGCGGAA TCGGCAGGAC GCTTCGAGTC GATTACCGAA CAGGAGGTTT TCGATATCGA GTACTGGGAG ATGGAACAGG CCAAGATGAC GAAGGTCCGC CACGACGTGT TTGCCGGCAA GGTTGCCCTG GTAACCGGTG CGGCAAGCGG CATCGGACTG GCGACGGCAA GGGCGTTCCG TCAGCGCGGC GCCGAGCTGG TCATTCTGGA CCTGAACCCT GAGGCGCTTC AGCATGCGGC CGAAGAGCTC GGCGGGGGAG TGCTTCCGAT TGCGTGCGAC GTTACCGACC GCGCTTCCGT CAGGCGGGCC TTCGACAAGG TGTGCCGCCG TTACGGAGGG CTGGATATCG TAGTCTCAAA TGTAGGCGTC GCCCTGCAGG GCCGCATAGG CGACGTTCCG GACGAGGTGC TTCGCCGGAG CTTCGAACTC AACTTTTTTT CGCATCAGTC CATAGCCCAG GATGCGGTCA GGATCATGCG ACTGCAGGGA ACCGGAGGAG TCCTGCTCTT CAACGTTTCC AAGCAGGCGG TCAATCCGGG TCCCGATTTC GGGCCGTACG GCCTGCCCAA GGCGGCGACC ATGTTTCTCG TGCGCCAGTA TGCGCTCGAT CACGGTCGCG ACGGCATCAG GGCAAACGGC ATCAATGCTG ACAGGATCCG CACCGGCCTT CTGACCGACG AAATGATCAA AACCCGTTCG AAAGCGCGGG GGCTGAGCGA GCGGGAGTAT ATGGCCGGCA ACCTTCTGCA GGTCGAGGTC ACGGCCGAGG ATGTCGCCGA GGCATTCGTG CACCAGGCGC TCGAAACGAA GACGACCGGC TCGATCGTCA CGGTTGACGG CGGCAACATT GCCGCCGCTC TGCGCTGA
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Protein sequence | MQNLWKDADL QRSVTAQRST DDIPVELAEL VYASRLLGSE SSLVMHGGGN TSVKSELHDI IGYRVNVIFI KGSGVNLAGV DAHDFMPVRI EPLQKLQHLY ATGGRSSEED IQQFSTQRFK NFLYLNLFYL TEHMVNHSLS PSIETLLHVF LPHRFIFHTH STALLTLSNQ PDGQDLCREV LGESFGMVPY IKPGLGLARS AAAAYESAPS IRGLVLQKHG LVTFADTPDE AYHCMIESAN RLEERIARAG RKVFPSVSLP AGIASLEDVA PVIRGAVVEE IMPGSRDYRQ FVLEFRTSPD ILAYVNSDSL SDVSQRGAMT PDFIIRTKNR PLVVPAPDAS DLDAFKTAIH EAVEQYEAEY RAYFLRRRLA SGIEVSMLDP LPRVVLVPGL GLFGLGRTAR EAAVNADIAE STASAILDAE SAGRFESITE QEVFDIEYWE MEQAKMTKVR HDVFAGKVAL VTGAASGIGL ATARAFRQRG AELVILDLNP EALQHAAEEL GGGVLPIACD VTDRASVRRA FDKVCRRYGG LDIVVSNVGV ALQGRIGDVP DEVLRRSFEL NFFSHQSIAQ DAVRIMRLQG TGGVLLFNVS KQAVNPGPDF GPYGLPKAAT MFLVRQYALD HGRDGIRANG INADRIRTGL LTDEMIKTRS KARGLSEREY MAGNLLQVEV TAEDVAEAFV HQALETKTTG SIVTVDGGNI AAALR
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