Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2730 |
Symbol | |
ID | 6461201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2819667 |
End bp | 2820593 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642728890 |
Product | Integrase catalytic region |
Protein accession | YP_002019505 |
Protein GI | 194337711 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTGC GCAGATGGTG GGTCAGCGAC AAAGAGCCAT TGCCGGTGGC AAAGCAATGC GTCCTTGTGT CCGTTAATCG TTCGACGATA TATTTGCCGT CTATCGTGTT GTTTCCTGAT GCAGAAGACT TGCAGTTGCT TGAACTGATT GACAAGGAGT ACACCAAGCA TCCATTTTAT GGTAGTCGTA AAATCATGCA CTATCTTCGT AGCGAGGGTT ACCAGATCAA CCGGAAACGG GTTCAGCGGC TTATGCGAAG GTTGGGTCTG GCCGGTATGG CACCGGGCCC CAACACCAGC AAACCGCATC CGGAGCACAA GATCTACCCC TATCTCTTGC GGGGAGTTGA TGTCACAAAA CCCAACCAAG TCTGGTCGAC TGACATCACC TATATTCTCC TTCCAAAGGG CTTTATGTAT CTGGTGGCAG TCATCGACTG GTATTCCCGG AAAGTACTCT CCTGGCGATT ATCGAACTCG ATGGAAAGCA CCTTTTGCGT TGACTGTCTG CAAGAAGCGT TACGAAAATA CGGGACACCC GATATCTTCA ACACCGATCA AGGCGCCCAG TTTACGAGTG CCGCCTTTGT CGGAGCGCTC ACGGAGCACC CATCCATCAG TATTAGCATG GATGGACGTG GCCGAGCACT GGACAACATC TTTGTCGAAC GACTCTGGAG GAGTGTCAAA TATGAGGATA TATATCTCAA AGGTTACTCC ACCGCAGCAG AATTACAGTG CGGATTAAAG GAATATTTTG TATTGTTCAA CGTTGAAAGG CAGCATCAGT CGTTGGGCTA CAGTACGCCA GATAAGGTTT ACCGGACAGC CGTTGGAGGT GGTGCAAGAA TAGTTGACAA GTATAACAAG AACAAGCAGA CAGAAGAGTT AAAGGTAAAA GAGGGGCAGC GCCTTTCCGC TGCATGA
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Protein sequence | MSVRRWWVSD KEPLPVAKQC VLVSVNRSTI YLPSIVLFPD AEDLQLLELI DKEYTKHPFY GSRKIMHYLR SEGYQINRKR VQRLMRRLGL AGMAPGPNTS KPHPEHKIYP YLLRGVDVTK PNQVWSTDIT YILLPKGFMY LVAVIDWYSR KVLSWRLSNS MESTFCVDCL QEALRKYGTP DIFNTDQGAQ FTSAAFVGAL TEHPSISISM DGRGRALDNI FVERLWRSVK YEDIYLKGYS TAAELQCGLK EYFVLFNVER QHQSLGYSTP DKVYRTAVGG GARIVDKYNK NKQTEELKVK EGQRLSAA
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