| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2686 |
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| Symbol | |
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| ID | 6462442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2775057 |
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| End bp | 2775833 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728846 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002019462 |
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| Protein GI | 194337668 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00673203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCATG CCTTGATAAC AGGAGCATCC ATGGGTATTG GTGCAGCCTT TGCCCGGGAG
TATGCCCGTC AAGGTCATAA TCTTGTACTG GTTGCCCGCT CGCATGCTCT CTTGCAGACT
CTGGCAGAGG AGCTTCGGCG GGAAAGTGGG GTTGCAGTGA CGGTTTGTGT TGAAGATCTG
AGTGATGCCG AAAGCCCGGC CCGGATTTAT GCATGCTGTC GGAGGCAGCA TATCGGGGTT
GATCTTCTTG TTAATTGCGC AGGGTTATCG TATGCTGGCG ATTTTCAGGA GATTCCGTTT
GGAAAGCTCG AAGAGATGAT GATGGTCAAT ATGATGGCAA TGGCCCGTCT TACGCGTCTT
TTTTTGCCGG ATATGGTCAC AAAAAGAGTC GGGAGCATTA TTAATGTCGC CTCTCTTGGT
GCTCTTCAGG GAGTTCCTGG CCTTGGTCTC TATTCGGCCA CAAAAGCATT TGTTTTAACG
CTCAGCGAAG CGCTTCACGG AGAGCTGAAA GGAACGGGGG TAAAAGTGGT TGCGGTCTGT
CCCGGTTTCA TCAACACAGA CTTTTTTGAA CATGCAGGTC ATAACAGAGC AAACCTCCGT
CTTCCGGTGT ATGGGACTGG CGTGGTTGTT AAAGCAGCAA TCAAAGGTCT GAAAAAAAAC
AGGGTACGGG TATTTCCCAC CCTGATTGAT ACGGTTCTGG TCTTTTCACA AAGAGCGGTT
TCGAGGAAAA TTGTTATACG CATTGCCGGT TTTATTGCAG CAGTAAAGGA TTGTTGA
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| Protein sequence | MQHALITGAS MGIGAAFARE YARQGHNLVL VARSHALLQT LAEELRRESG VAVTVCVEDL
SDAESPARIY ACCRRQHIGV DLLVNCAGLS YAGDFQEIPF GKLEEMMMVN MMAMARLTRL
FLPDMVTKRV GSIINVASLG ALQGVPGLGL YSATKAFVLT LSEALHGELK GTGVKVVAVC
PGFINTDFFE HAGHNRANLR LPVYGTGVVV KAAIKGLKKN RVRVFPTLID TVLVFSQRAV
SRKIVIRIAG FIAAVKDC
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