Gene Ppha_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2642 
Symbol 
ID6461808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2731456 
End bp2732346 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content51% 
IMG OID642728799 
Productalpha/beta hydrolase fold 
Protein accessionYP_002019419 
Protein GI194337625 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATT TTACGTCCAA GCGTTGCCGT CTGTACTACC ATGATAGTGC AGAATCTGAT 
CCTTCAAGTC AGGAAAAGCC TGTGGTGCTC TTTGTAAACG GGTGGGCTGT CTCCTCCCGT
TACTGGACAC CGCTGGTCGA GAGGCTCTCG GCGAAGTACC GCTGCATTAC CTATGACCAG
AGCGGGACGG GAAAAACGGT CATCAAGGGC TACAACCCGA CCTTTACCAT TCAGGGCTTT
ACCGATGAGG CTGCCGAGCT TATTGAACAT CTTGGACTCC ATAACTCAAG AAAACTGCAT
ATTGTCGGCC ATTCGATGGG CGGCATGGTC GCAACTGAAC TCTGCCTGCG CTACCGGGAT
GCCCTGCTGT CGGCCACCAT CATTGCCTGC GGCATCTTTG AGGAGACCGC GCTCACCTCT
CTTGGCCTCT TTTTTCTGGG AGGATTGATT GATGTCTCCA TGAATTTTCG CAACGTCTTT
CAGCATGAGC CTCTGAAAAG CCTTTTTATC AAACGGGCGG CCACAAAAGC AATCAGCAAG
GAGTACCACG ATGTTCTTAT CGAAGACTTC ACGCAATCCG ACAAGGAAGC AACCAATGCT
GTGGGCAGGT TCTCGATCGA CAGGGAGGTT TTGAGAAGGT ATACCCGTCA CGTGCTGCTG
ATCTCTTCAC CAATGCTCTG CTGTGTCGGT ATGGCCGATC AAACCATTCC TCCCGAGGGT
ACCCTCACGC TCTACGAAAG ACGCAAGGCC GTCTCTTCTG CTCCGACCAG CCTGGCAAAG
TTTATGGATC TTGGCCATCT GCCCATGCTT GAAGACACTG CCCGATTTGC GAATGAACTT
GAAAAACATT TTGAATTTGC GGAACAATTT CATAAAAAGA GTCCGCAATA A
 
Protein sequence
MSYFTSKRCR LYYHDSAESD PSSQEKPVVL FVNGWAVSSR YWTPLVERLS AKYRCITYDQ 
SGTGKTVIKG YNPTFTIQGF TDEAAELIEH LGLHNSRKLH IVGHSMGGMV ATELCLRYRD
ALLSATIIAC GIFEETALTS LGLFFLGGLI DVSMNFRNVF QHEPLKSLFI KRAATKAISK
EYHDVLIEDF TQSDKEATNA VGRFSIDREV LRRYTRHVLL ISSPMLCCVG MADQTIPPEG
TLTLYERRKA VSSAPTSLAK FMDLGHLPML EDTARFANEL EKHFEFAEQF HKKSPQ