| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2629 |
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| Symbol | |
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| ID | 6461675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2719844 |
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| End bp | 2720923 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728785 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_002019406 |
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| Protein GI | 194337612 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2856] Predicted Zn peptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000486694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC ACCGTATACG ACAGGCTCGT CAGGCGGCAG GGCTGACATT GGCTGCATTG
GGAGCGAAAA TTGGGGTCAC CCACACCGCT ATCCAAAAGT ATGAGAAGGG CATCATTACC
CCGTCATCGT CGATATTGTT GAAACTTGCT CAGGCCTGCG GAGTACGCAC TGAATATTTT
TTCCGTTCGC ATACCGTTGA ATTGGTCAAT CCTGAGTTCC GCAAGTTATC AACCTTTGGA
AAAACAGCAC AAGAAGAGCT GACCATCAAA GTCATTGATC TGGTTGAAAA GCGGGTAGAA
CTTCTTGGTT CATTTCCAGA CTCCCCTATC CCTGCATTCG AGCTTCCTGC TGGCCTTCCG
GAACACATAG AAAACCTTGA CCAGATCGAA GCGATTGCTG ACCAGGTACG CAACGCATGG
ATGCTCGGCA TGGATCCGAT ACCGGATGTA TGCGACACAT TTGAAGCTTG CGGGCTTCTG
GTCATCGTTG TCAACAATAT TCATCCTGGA TTTTCAGGTT TAAAAGCTAC AGCCCGAACA
AATGATGGCC GAACCTATCC CATTATTGTG GTGTCAGCAC GCTGGCCGGG AGATCGGCAA
CGTTTTACAC TGGCGCATGA ATTGGCTCAT CTCTTGCTCT CAGGTCGTCT TGCTGATAAC
CTTGATGAGG AAAAAGCCTG CAACCGTTTT GCCGGAGCTT TCCTTGCTCC TGCCGTTGCC
GTAACCCGCC TGCTTGGTCA GCACCGTGAC GCCTTGGAAT GGAAAGAGAT CTACACCCTC
AAGCACGAAT TCGGGCTCTC TATGGCTGGG TGGCTTATGC GTGCAAAACA ATGCGATGTT
ATAACTGAAG CGCTTTACCG TTCAATGACG ATACGGTTTT CAGCAAAAGG ATGGCGCAAA
CTTGAACCGG AAGAGCCCGT ACCACAGGAA AACCCGAAAC TCTTTGAACA ACTGGTCTAC
CGTGCACTCG GTGAACACTG CATCCCGGAA TCCAAAGCCG CCGAATTGCT TGGTATCCCG
ATGATGTCGT TTTACAAACA ACGCCAACTC GAAACAGCGG ATGATGCTCC TCATCAGTGA
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| Protein sequence | MIEHRIRQAR QAAGLTLAAL GAKIGVTHTA IQKYEKGIIT PSSSILLKLA QACGVRTEYF
FRSHTVELVN PEFRKLSTFG KTAQEELTIK VIDLVEKRVE LLGSFPDSPI PAFELPAGLP
EHIENLDQIE AIADQVRNAW MLGMDPIPDV CDTFEACGLL VIVVNNIHPG FSGLKATART
NDGRTYPIIV VSARWPGDRQ RFTLAHELAH LLLSGRLADN LDEEKACNRF AGAFLAPAVA
VTRLLGQHRD ALEWKEIYTL KHEFGLSMAG WLMRAKQCDV ITEALYRSMT IRFSAKGWRK
LEPEEPVPQE NPKLFEQLVY RALGEHCIPE SKAAELLGIP MMSFYKQRQL ETADDAPHQ
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