Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2593 |
Symbol | |
ID | 6461460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2666929 |
End bp | 2668650 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642728750 |
Product | transposase IS4 family protein |
Protein accession | YP_002019372 |
Protein GI | 194337578 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGTTG ATATTATTCC AAATAGAAAC TCTCGTCCCG CCATCTTGCT CCGTGAGTCT TGGCGTGAGA ACGACAAAGT CATGAAACGC ACCGTGGCTA ATATTTCGAA CTGGCCTCCG GAACAGGTTA CTGCGTTACG ACGGGTTTTG AAAAATGAAC CGCTGGTCTC ACCCAGTGAG GTATTTTCAA TTGAACGCTC ATTGCCTCAT GGTCATGTTG AAGCTCTTCT TGAGATGATT CGTCTTATCG GTCTTGACAA AATGATCGCT GCCCGACGGA CTCGTGAGCG TGATCTCGTT TTGGCAATGA TCGTCGAACG CCTGATTGCG CCATCTTCAA AATTGGCCAC TACGAGGTTA TGGCATAGCA CAACTCTTGC GCAGTTACTC AATGTTGAGG ATGCTGATGA AGATGAATTG TATGCAGCCA TGGACTGGTT GCTGGAACGC CAACCTGTTC TTGAAAAGAG ATTTGCAAGC CGTCACCTTG GTGAAGGTCA ACACGTATTT TATGATGTGA GCAATAGCTC TTATGAGGGC CATTGTTGTC CCCTGGCACG TTTAGGCCAC GATAAACAGG GTCGGCGAGG CAAGCCAATT ATTACCTACG GAGTACTGAC CGATGTCAAG GGGCGTCCCA TAGCTGTTGA GGTTTATCCG GGTAACACTG GTGATCCCAG TACCGTAGCA GACCAAGTGG AGAAGCTGAA AGAGCGTTTT GCCTTGCAGC GAGTGGTTCT GGTTGGAGAT CGTGGTACAT TGACTCAGAC ACAGATTGAT ATCCTGAAAA CTCATCCCGG GATTGGGTGG ATTTCAGCGT TGCGAAGTGA AAACATTCGC AAACTTGCAG CAAATAATCA TTTGCAGTTG TCATTGTTTG ATGAAAAAAA TCTGGCAGAA ATAACTTCGG CAGATTTCCC CGATGAACGC CTGATCGCCT GCTTCAACCC CCTGCTCTGT GATGAACGGA GGCGCAAGCG CCAGGAGTTA TTGGATGCAA CAGAAAACAA GCTACAAAAA ATTGTTGATG AGGTTCATCG TCGCACGAAA ACCCCGCTGA GTGCATCGGA AATTGGTCAA AAGGTTGGCA AGGTGATCAA TGGGTATAAA ATGGCCAAAC ACTTTGAGCT ATCGATTGCT GACGGAGAGT TTTCCTTCAA GAGGAAAGCT GAATCGATCG CACAAGAAGC GGAGTTGGAT GGCATCTATG TTATTCGCAC CAGCGAAAGC CGACAGAACC TGTCGGCAGA GGATACCGTA AGAAGCTATA AGAATTTAGC AAAAGTTGAA CAGGTTTTCC GCACCTTCAA AAGTATTGAC CTGCAGGTAC GGCCCATATA CCATTATTAT GCCGAACGTG TTCGTGCCCA TATCTTTCTG TGCTTGCTGG TTTATTATGT TGAGTGGCAC ATGCGTCAAG CACTTGCTCC TTTGCTCTTC GATGATGAAG AACTTGCTCA GGACAGGAAA GAGCGCGATC CGATCAAGCC TGCAGTCTCA TCCAAATCGG CAAAAAAGAA AAAAAGTACA AAAACAAACA AAGAGGGATT CCCCGTTCAC AGTTTTCGCT CGCTTATCAT GGAACTGGGC ACTCGCAGTC GAAACCGGTG CAGACTGAAA TCTGCTCCAG GAAGCCCTGT GATTTCCCAG GATACCGAAC CAACACCACT TCAAACCCGT GCAATGGAAT TGATTCGTTT GTACCCAGTA GATGGAAGTT GA
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Protein sequence | MHVDIIPNRN SRPAILLRES WRENDKVMKR TVANISNWPP EQVTALRRVL KNEPLVSPSE VFSIERSLPH GHVEALLEMI RLIGLDKMIA ARRTRERDLV LAMIVERLIA PSSKLATTRL WHSTTLAQLL NVEDADEDEL YAAMDWLLER QPVLEKRFAS RHLGEGQHVF YDVSNSSYEG HCCPLARLGH DKQGRRGKPI ITYGVLTDVK GRPIAVEVYP GNTGDPSTVA DQVEKLKERF ALQRVVLVGD RGTLTQTQID ILKTHPGIGW ISALRSENIR KLAANNHLQL SLFDEKNLAE ITSADFPDER LIACFNPLLC DERRRKRQEL LDATENKLQK IVDEVHRRTK TPLSASEIGQ KVGKVINGYK MAKHFELSIA DGEFSFKRKA ESIAQEAELD GIYVIRTSES RQNLSAEDTV RSYKNLAKVE QVFRTFKSID LQVRPIYHYY AERVRAHIFL CLLVYYVEWH MRQALAPLLF DDEELAQDRK ERDPIKPAVS SKSAKKKKST KTNKEGFPVH SFRSLIMELG TRSRNRCRLK SAPGSPVISQ DTEPTPLQTR AMELIRLYPV DGS
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