Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2562 |
Symbol | |
ID | 6462279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2629599 |
End bp | 2630777 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642728719 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002019341 |
Protein GI | 194337547 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTC CTTATTTTGC CCGGAATCGT TGTTCTGCCT ACAGCCATCA TTCCGCCATC ACCATCCGTT CTTGCCGCAT TGCGAAAATA GAAGAAAACA ATAGCCGCGA AATTCTTATT TTTGCGAACA GTGAAGCTCT CGCTGTTGTT TACATCTTTG CAGCCGGGCT CTTTTTTTAT TTTCACCGTT TCATGCCTAA CTCATCAATT GTCATAACCG GGGCTACCGG ATATATCGGT TCCCAGATTC TTCTTGCGCT GCTTGCACGC TTTCCCGGAG AGCGTCGCTG CAGGGTGATT GCCCGGAAAA GCTCGGATTG CTCTTTTCTG GAGAGCTTGC CTGTCGAGAT TGTTCGGGCG GATATGCTTG ATCCTCTTGC CCTTCTTGAG GCTTTCAGGG GAGCGGAAAC GGTCTTTCAT TGTGCGGGAC TTATCTCCTA TACCAGACAC TCCCGAAATG CGCTCTATGA GGCCAATGTG GTCGGGACAA GAAATGTGGT CAATGCCTCC CTGCACCATA AGGTGCGCAG GCTTGTTTTG ACCAGCTCCA TTGCCGCCAT CGGCGCCTCC GAGGATGGTT CGCCAGCCAG TGAGTCATCC ACCTTTCAGG AGTGGCAGCG ACGGAATGGT TATATGGAGT CGAAGCATCT TGCTGAACTT GAGGGGCTGC GCGGAGTTGC AGAGGGCCTT GAAGTGGTCA TGGTTAATCC TGGTGTGGTT ATTGGTGTTG ACCGCCGGAA TCCCGCTTCG GTCAGTTCTT CGAACGAGGT ATTGCGCCTT GTCTATCAGG GAAAGCTGCC CTTCTTCCCT TCGGGAGGCA CCGGTTTTGT TGATGTCCGC GATGTCGCTG ATGCTCACCT GGCGGCTTGG GAAAAAGGGC GTTCAGGGGA GCGTTATGTT GTGGTTGGCA GCAATCTGAC CTTCCGGGAG CTTTTTGCCC GCATAGGGAC TCTTTCTGGC AGCAGCAGTG GCCGGGCATT TATGGTGCCG GATGCTCTTG GTCTGCTTGC CGGTCTTGGC GGAGAGCTTT GGTCGATGCT CTCGAACCGT CCCTCCTTTA TCAGCCTCGA GAGCATTCGT ATCGCCTCAA GGATTCTTGC GTTCAGTAAT ACCCGCTCAG AGCAGGAGCT TGGTTTGTGT TACCGCGAGC TGTCCGAAAC GCTCAAGACT CTGCTCTGA
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Protein sequence | MKAPYFARNR CSAYSHHSAI TIRSCRIAKI EENNSREILI FANSEALAVV YIFAAGLFFY FHRFMPNSSI VITGATGYIG SQILLALLAR FPGERRCRVI ARKSSDCSFL ESLPVEIVRA DMLDPLALLE AFRGAETVFH CAGLISYTRH SRNALYEANV VGTRNVVNAS LHHKVRRLVL TSSIAAIGAS EDGSPASESS TFQEWQRRNG YMESKHLAEL EGLRGVAEGL EVVMVNPGVV IGVDRRNPAS VSSSNEVLRL VYQGKLPFFP SGGTGFVDVR DVADAHLAAW EKGRSGERYV VVGSNLTFRE LFARIGTLSG SSSGRAFMVP DALGLLAGLG GELWSMLSNR PSFISLESIR IASRILAFSN TRSEQELGLC YRELSETLKT LL
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