| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2512 |
|---|
| Symbol | |
|---|
| ID | 6463805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2593425 |
|---|
| End bp | 2594561 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642728682 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002019304 |
|---|
| Protein GI | 194337510 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4637] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.504364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAG CAATCAGAAA AATAAGCATC AACGGGTATA AGTCGATTCG TGAGTTGAAG
GAGTTTGAAC TCCGTGATCT GAACATCATC ATCGGGGCCA ATGGCTCCGG AAAAAGCAAC
CTCGTGCAGG TTTTTCAGTT GCTGATGGCG ATGTCCGGCA AAGGGATGCA AAAGTTTATT
CTTGAAAATG GAGGGGCCGA CAATTTTCTT CATAATGGCC CCAGGAACAC TCCCGCAATA
TCGATGGAGT TTGAATTCGA GTCTCATAGC GATTACAGAC AAGGATCGAA CTACTACCGT
TTTGACTTGA CCCCTACTGT TGACGATACC TTTCTTGTCA TTGAAGAACG GAAATATGTT
ACAACGAATT GGCGACCTTA TGGCAGTCCA TCACTTGAAA GCCGACTGGA GGACGAGCAG
GAAGAGCCAT CTGCTACGGG AGGACATGGG GTAGGCTATT TTGTTTATCG ATCCATAGCC
AACTGGATGG TCTATCACTT CCATGACACC AGTTCATCGG CCCCTATGCG CCGCTACCAG
ATCATCGAAA ACAATGCTAA GCTCGGAAGC GACGGCGGCA ATATCGCCCC GTTTCTGCTG
AAATTGAAAA CCGGCAACAA GTTCCCTGCC CCTTCATATT ATAAAGAGAT TATCAATACC
GTCCGGCTGG TCATGCCTTT TTTTGACGAT TTCCGTCTTG ACGTACTCAA AATGGGCGAA
GCGGAAAAAG TCAAACTCAG TTGGCAACAG AAAGGCTCCG ATTTTCCAAT GCAGCCCTAT
CACCTCTCCG ATGGCTCCAT TCGGTTCATC TGCCTCGCCA CTGCATTGTT GAATCCATTT
CCGCCTTCCG TCATTGTCAT TGACGAACCG GAACTTGGCC TGCATCCGGA GGCCATAAGG
ATTCTCGGAG AACTGATTCG TGATGCGGCA AAACGAACGC AGATCATTGT CGCGACGCAG
TCCCCCCTGC TGCTCGATCA GTTTTCCATC GAAGATATCG TGGTGGTAAA CCGCAGAGAG
GGACAATCTG TTTTTGAACG ATTGCATCGT GCCGATTTCG ATGAATGGCT GGAAAATTAT
TCTGTCGGTG AGCTCTGGTC ACGGAATATC ATTGCTGGAG GCACCTGCCA TGAATGA
|
|---|
| Protein sequence | MKGAIRKISI NGYKSIRELK EFELRDLNII IGANGSGKSN LVQVFQLLMA MSGKGMQKFI
LENGGADNFL HNGPRNTPAI SMEFEFESHS DYRQGSNYYR FDLTPTVDDT FLVIEERKYV
TTNWRPYGSP SLESRLEDEQ EEPSATGGHG VGYFVYRSIA NWMVYHFHDT SSSAPMRRYQ
IIENNAKLGS DGGNIAPFLL KLKTGNKFPA PSYYKEIINT VRLVMPFFDD FRLDVLKMGE
AEKVKLSWQQ KGSDFPMQPY HLSDGSIRFI CLATALLNPF PPSVIVIDEP ELGLHPEAIR
ILGELIRDAA KRTQIIVATQ SPLLLDQFSI EDIVVVNRRE GQSVFERLHR ADFDEWLENY
SVGELWSRNI IAGGTCHE
|
|---|
| |