Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2488 |
Symbol | |
ID | 6463661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2576972 |
End bp | 2577760 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642728666 |
Product | Patatin |
Protein accession | YP_002019288 |
Protein GI | 194337494 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CTGCTCTTGC ACTCGGGGGA GGAGCTGTCC TCGGTGCCGC TCATGTTGGT GTGCTGAGGG CGCTGGCTGA ATTGCAGATT TCGGTATCCA TGGTCAGTGG CACCAGTATT GGCGCCTTTA TTGCTTCGCT CTATGCTTTT GGCAAAAGCT GGCAGGATAT TCGCGATATT GCCTTTTCTA TGGACTGGTT TGATCTGTCG AGTCTGTCGC TTTCGCAGTA CGGTATCCTG ACGAATAAAA AATTTGGCGG TATTGTAACT GAGCTGCTCG GAGAGAAAGA TATCAAAGAC GCCTTGATCC CGCTTTTTAT GGTCGCAACC GATATTGGAA CCGGCAAAAA AGTTGTTTTC AGCGAAGGGA ATGTGGCTGC TGCGGTGATG GCAAGCAGTT GTATTCCCGG TATTTTCAGA CCAGTTGATT ATTCCGGTGC GCTCCTTGTC GATGGTATGC TTGTGGAAAA TGTTCCCGTC TCCCCACTTG TGGAAAATGG TGCGGAATCG ATTGTCAGTG TTGATCTTCT GGCCTTTCAT GTTTTCAAAA AACCTGAAAA TATTATCGGA ATTTTGCTGA ACGCATTTTA CAGTTCGCTT ACCAATACAA CAGCCATACA GATAGCCGAT GCAGATTTAT CTATTTCGCC AAATCTGTCG AAATTCAATC TCATCGATTT CGACCAGATT CCTGATCTCA TTGAGGCGGG TTACCAGGCA TCCTTACCCG TGCTGAAAGA ATGGGTGGCA GGAATGAGGA ACGCCTCCGG CTTGGTCGAG TTGGAGTAA
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Protein sequence | MKKTALALGG GAVLGAAHVG VLRALAELQI SVSMVSGTSI GAFIASLYAF GKSWQDIRDI AFSMDWFDLS SLSLSQYGIL TNKKFGGIVT ELLGEKDIKD ALIPLFMVAT DIGTGKKVVF SEGNVAAAVM ASSCIPGIFR PVDYSGALLV DGMLVENVPV SPLVENGAES IVSVDLLAFH VFKKPENIIG ILLNAFYSSL TNTTAIQIAD ADLSISPNLS KFNLIDFDQI PDLIEAGYQA SLPVLKEWVA GMRNASGLVE LE
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