Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2476 |
Symbol | |
ID | 6461396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2563962 |
End bp | 2564606 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642728654 |
Product | NLP/P60 protein |
Protein accession | YP_002019276 |
Protein GI | 194337482 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.188506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCATAC AGCAAACTCT CTCATCTCCT TTTCGCGTGA GTTTTCCGTT GAAAAAAATT ACCCGCACCT GTCGTGCATT CGTTTTCTTC TCAGCATTGG CATTTCAATT GACTCTTCCT GCAACGGCCT TTTGTGAACT CTCTGCAGAA GTGCCCGTAA CAGCACAGAC GGTGCAGCCA CCCTCTCAGC CGCATCAGAC CTTTGGGCAT ATGAAGACAT TTTTTAATGA TGTCACCAAA TATTTTGGTA CACGATACCG TTGGGGTGGT CAGACTCCTG CAGGATTTGA CTGTTCCGGT TTTGTGGGGT TTATGTACGA CAAGGTCTTC AATATGCGTC TTCCGCGTAC ATCAAGGGAG ATGTCTGCCA TTGGTACAAA AGTTGACAAA GATCAACTTC AGCCCGGAGA TCTGGTCTTT TTTCAGACAA GAGGCAGAGG CATTAACCAT GTTGGGATCT TTATCGGTGC AAATACCTTT GTTCATTCAT CACTATCAAG GGGGGTTGTC GAAGAACAGC TCAAGCAGAA TTTCTATGAG AAACAGTTTG CCGGAGCTGT GCGCATTCTG GAATTGTCAG TAAATAAACT TCCGGTTACG GCGCCGGTTT TATCCGATAA GGTCGAGACG ATAAACCCCT CCTGA
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Protein sequence | MPIQQTLSSP FRVSFPLKKI TRTCRAFVFF SALAFQLTLP ATAFCELSAE VPVTAQTVQP PSQPHQTFGH MKTFFNDVTK YFGTRYRWGG QTPAGFDCSG FVGFMYDKVF NMRLPRTSRE MSAIGTKVDK DQLQPGDLVF FQTRGRGINH VGIFIGANTF VHSSLSRGVV EEQLKQNFYE KQFAGAVRIL ELSVNKLPVT APVLSDKVET INPS
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