| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2390 |
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| Symbol | |
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| ID | 6463113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2476587 |
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| End bp | 2477324 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728575 |
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| Product | hypothetical protein |
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| Protein accession | YP_002019198 |
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| Protein GI | 194337404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.311617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATTT ATCGCCGTTC TTCAGAAAGA GAGGAGGAGG GGTCAGGCAA GGGTCTGATG
CCCTCTTCGG GTTCGAGCCG GGAAACTGAT TTCATGGCTG ATGGATGGCG GGTGTTCAAG
ATCATGGCGG AGTTTGTCAG TGGCTTTGAG ATGATGTCTG ATGCAGCTCC GGCGGTAGCT
GTTTTTGGTT CTACGCGGGT GCCAGCGGAG AGTGCTGAAT ATCTTCTTGC CGAGAGGCTT
GGGAGTCTCC TTGCTGCTGA AGGTTTTTCG GTGATAACCG GAGGTGGGCC GGGTGTTATG
GCGGCAGCGA ACAAGGGAGC ACAAGGCGCT GGCGGGGTAT CAATCGGTTT CAATATCAAG
CTTCCAAACC AGCAGCAGCC GAACAAATAC ATTGATCATG ATAAATTGGT CAGTTTTCAG
TATTTTTTTG TGCGCAAAGT GATGTTCATG AAATATGCCC AGGCATTCAT CGCTTTGCCA
GGTGGTTTTG GTACACTTGA TGAGGTGATG GAGGCTATTA CGTTGATACA GACCGGGAAG
AGTGAGCGCT TTCCTGTTAT ATTGGTCGGA AGAAGTTACT GGGAGGGGTT TTATCGCTGG
ATTGAGGAGA GCATGTGCCG TGATAAGGGC TATATCCATG CTGATGATCT TGGATTCATT
TATCTGGAAG ATAGTCCGGA CGAGGTGATA GCAATTATCA AGAGATTTTA TCCGGATGGT
TATTCCCTGA ATTTTTAA
|
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| Protein sequence | MDIYRRSSER EEEGSGKGLM PSSGSSRETD FMADGWRVFK IMAEFVSGFE MMSDAAPAVA
VFGSTRVPAE SAEYLLAERL GSLLAAEGFS VITGGGPGVM AAANKGAQGA GGVSIGFNIK
LPNQQQPNKY IDHDKLVSFQ YFFVRKVMFM KYAQAFIALP GGFGTLDEVM EAITLIQTGK
SERFPVILVG RSYWEGFYRW IEESMCRDKG YIHADDLGFI YLEDSPDEVI AIIKRFYPDG
YSLNF
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