| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2365 |
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| Symbol | |
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| ID | 6461220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2447418 |
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| End bp | 2449616 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642728551 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002019174 |
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| Protein GI | 194337380 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.771768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCAC AGATAGGGAA AGATCATTAC AAAAAGCTTC ACGAGATACT TCAGCTTTCT
CGCAAGAATC TCAAAAATTT TGATGAATCG CTGATTCAGC GTGCTTTTTT TATGTGCTAT
CGGGCACACG AGGGAGAAAA ACGGGCTTCA GGTGAACCCT TTTTCTACCA TCCTGTTGAA
GTTGCCACCA TTCTGCTCAA GGAACTTCCT CTTGATGGCG TCTCTGTAGC GGCAGCCTTA
TTGCATGATG TCATTGAAGA CAGCGGCTAT ACCTATGAGG ATATTGTTGC TGAGCTGGGC
GTTGAAGTTG CTGATATTGT TGAAGGGCTG ACCAAGATTT CCGGTATCAT GATCAACCGG
GAGACGACCC AGGCAGAGGG CTTTCGCAAG ATGCTGCTCT CGATGGTCAA GGATATCCGC
GTTATTCTGA TCAAGTTCTG CGATCGGCTG CACAACATGA GAACACTTGA ATCGCTTCCT
GAGCACAGAC GGTTGAAGAT TGCGCTTGAA ACGCGGGACA TATATGCACC TCTTGCGCAC
CGCTTTGGTC TTGGAAAGAT GAAGGTCGAG TTTGAAAACC TTGCCCTCCG ATTCATCGAT
CCGGAGATGT ACGAATTTCT CCAGCAGAAA ATCCGTATGG GTAAAGGTGA CCGGGTCAAC
TATCTCGGAA AGATGATTGC TCCCATCAAA GATGATCTTG AGCAGCAGGA GTTCAAGGTG
GAGGTGCAGG GACGGGCAAA GCATCTCTTT TCGATCTACA ACAAGATGCG CAACAAGAAC
AAGAGCTTTG AAGATATTCA TGATCTCTAT GGTATCAGGG TGATTATTGA TACCGAGCGT
ATCGCTGACT GCTTTTCGGT TTACGGTTTT ATTACACAGC AATATCCTCC GGTTCCGCAG
TATTTCAAGG ACTATATCTC GGTACCGAAG CATAACGGAT ACCAGTCCCT TCATTCGGCC
ATTATCGGCC CGAAGGGTCA TATGGTTGAG TTGCAGATTC GCACGAAGCG TATGCATGAG
TTTGCAGAAC TCGGCGTTGC GGCTCACTGG CGATACAAGG AGAAGATATC GCGCGATGAT
GTCAACATCG ATTCGTTTCT TCGCTGGGCC AGAGAGCTGA TCAAGGATGC TGATTCGGCG
GCCTCTTTTA TGGAGGGGTT CAAACTTAAC CTCTACCACG ACGAAATCTA TGTTTTTACT
CCGAAAGGAG ATATGAAAAC CATGCCTGCG GGGGCTACAC CGATCGATTT TGCCTATGCC
ATTCATACGG AGGTTGGCAA CGGCTGTATC GGGGCCAAGG TGAATGGCAA GATCGTTCGC
TTGAATGCGC AGCTTAAATC GGGTGATCGG GTCGAAATTA TCACCTCGAA AAACCAGAAG
CCGAAACCTG ACTGGCTTAA GGTGGTCATA ACCCAGCGGG CCAAGCTGAA GATACGTTCA
GCCATCAATG AGGAGCGCCG TCTGCAGGTC GAGAAAGGGC GGGGTATGTG GGAGAAGATG
GTTGCTGGTA CCAAAAAGCT TTTATCGGAC AGCGACATCA TCCAGCATGT TAAAGGGTAT
GGCCTTAAAA CGCCAGCAGA TTTCTTCAGC GCTCTTGCGA GCCAGCAGAT CAATGGTGAA
GAGGTTATTG AGCGGGCCAA CAATTCCCGC AAGGAGGAGC CGACAGCAAA AACACTCACT
GAAGAGGCGC GTGAGGTTGA AGATTATCTG CAGAAAGCGC GTCACGAACT GGATGCGGAG
GGTGTTCCGG CTAAAAAGGA CGATGTTGTT ATTGCAGGTA TGAACAATAT CGCCTATGCC
TATGCGAATT GCTGCCAGCC TGTTCCCGGT GATGAGGTGA TCGGCTTTGT TACCGCTGAG
GGGGTCAAGA TACATCGTAA AAACTGCGTC AATGTCAGTA ATGAGAATCT GCTGAAAAGC
GAGCGCATTG TCTCGGTTTC GTGGAACAGA AAAGTTGAGA CCGATTTTCT TGCCGGTATC
AAGATTGTTG GAGAAGACCG TCTCGGCATC ATGAATCAGC TTACAACGGT CATCTCAAAA
TTCGATACCA ATATCCGTAC CATTTCGCTG AACGCGCATG ACGGGATGTT TGTCGGTACC
ATGATGATCT ACGTTCGCAA TGCGGAAAAA CTGAATACCC TTATGGACAA ACTGAAAAAG
GTGCAGGGAA TATTTACGGT CGAACGGCTT GTAAGCTGA
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| Protein sequence | MLAQIGKDHY KKLHEILQLS RKNLKNFDES LIQRAFFMCY RAHEGEKRAS GEPFFYHPVE
VATILLKELP LDGVSVAAAL LHDVIEDSGY TYEDIVAELG VEVADIVEGL TKISGIMINR
ETTQAEGFRK MLLSMVKDIR VILIKFCDRL HNMRTLESLP EHRRLKIALE TRDIYAPLAH
RFGLGKMKVE FENLALRFID PEMYEFLQQK IRMGKGDRVN YLGKMIAPIK DDLEQQEFKV
EVQGRAKHLF SIYNKMRNKN KSFEDIHDLY GIRVIIDTER IADCFSVYGF ITQQYPPVPQ
YFKDYISVPK HNGYQSLHSA IIGPKGHMVE LQIRTKRMHE FAELGVAAHW RYKEKISRDD
VNIDSFLRWA RELIKDADSA ASFMEGFKLN LYHDEIYVFT PKGDMKTMPA GATPIDFAYA
IHTEVGNGCI GAKVNGKIVR LNAQLKSGDR VEIITSKNQK PKPDWLKVVI TQRAKLKIRS
AINEERRLQV EKGRGMWEKM VAGTKKLLSD SDIIQHVKGY GLKTPADFFS ALASQQINGE
EVIERANNSR KEEPTAKTLT EEAREVEDYL QKARHELDAE GVPAKKDDVV IAGMNNIAYA
YANCCQPVPG DEVIGFVTAE GVKIHRKNCV NVSNENLLKS ERIVSVSWNR KVETDFLAGI
KIVGEDRLGI MNQLTTVISK FDTNIRTISL NAHDGMFVGT MMIYVRNAEK LNTLMDKLKK
VQGIFTVERL VS
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