Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2353 |
Symbol | rpsB |
ID | 6462084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2436387 |
End bp | 2437154 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728540 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_002019163 |
Protein GI | 194337369 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00564969 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACATT TTCAGCTTGA AGAGATGCTC CGCGCAGGAG TCCATTTCGG TCACCTTGCA CGTCGCTGGT GCCCAAAAAT GAAGCCGTAC ATTTTCATGG AAAAAAACGG CGTTCATATT ATCGATCTGC AGAAAACCGT CGTTCTTGCC GATGAGGCAC TGAAGGCGCT TGAAGCAATT GCACAGACAG GCAGGGAGAT CATGTTTGTC GGTACCAAAA AACAGGCCAA ACACATTATT GCCGAACAGG CAGAGCGTGC AGGGATGCCT TACGTTTGCG AGCGTTGGCT GGGTGGTATG CTTACCAACT TCCAGACCAT TCGGCAGAGT ATCCGGCGCA TGAACTCCAT CGACCGGATG GCGACGGATG GAACGTATGA TATGATTACC AAGAAAGAAC GCCTGATGCT GGGCCGTGAA AAAGAGAAGC TCATGAGGAT TCTCGGTGGT ATTGCCACCA TGACAAGGCT TCCAGCCGCG CTCTTCATCG TTGACATCAA GAAAGAGCAT ATTGCCATCA AGGAAGCCCG CTCACTCGGT ATTCCCATCA TTGCCATGGT CGATACCAAC TGCGATCCTG AACTGGTTGA TTTCGTCATT CCAGCCAATG ACGATGCAAT CCGCTCCATT CAGTTGATGG TCAAGGCTGT TGCCGATACC GTCATCAACG CACGGGCGCT GAAAGTGGAA AATGAAGTGC TTGCCGGTAT GGATGAAGAG GAAGAGGATG GCGATATCGA CGTCGAAAAG GAAGAGATCA GCGAATAA
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Protein sequence | MSHFQLEEML RAGVHFGHLA RRWCPKMKPY IFMEKNGVHI IDLQKTVVLA DEALKALEAI AQTGREIMFV GTKKQAKHII AEQAERAGMP YVCERWLGGM LTNFQTIRQS IRRMNSIDRM ATDGTYDMIT KKERLMLGRE KEKLMRILGG IATMTRLPAA LFIVDIKKEH IAIKEARSLG IPIIAMVDTN CDPELVDFVI PANDDAIRSI QLMVKAVADT VINARALKVE NEVLAGMDEE EEDGDIDVEK EEISE
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