Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2332 |
Symbol | |
ID | 6462554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2407430 |
End bp | 2407939 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642728521 |
Product | hypothetical protein |
Protein accession | YP_002019144 |
Protein GI | 194337350 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000503232 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGAAAG CTGCTGCACC GATAATCACG CTGTTTGTTC TTGTTCTGGC AACCCTTCAG GGCTGTTACA GCTTTGCAGG TTCATCGCTG CCTGCACATC TGAAAACGAT TGCCATTCCG GTGTTTGAAG ATCGCAGCGC AGCCGGTATC GCGCAGCTCA GGGGGGAGTT GACCGGCTCT CTTGTCAATC GAATCGAGTC GCAAAGCCCT CTTCGCGTTA CTCCCTCTCT GGCTCGTGCC GATGCGTTGC TGGAAGGTGC CCTTATCTCC TTTTCTGATG CTCCGAGCCA GCTTTCGAGC ATAACCGAGC GGGCGATGAC GAATCGGGTT ACGCTTGTTG TACAGGTTAC AATGGTTGAT CGGGTGAAAA AAACAGCGAT GTTTACCCAA TCATTTGTCG GATTTTCCGA TTATCGTACT GGTGACCCTG TCGGCCAGCA GGAGGCGCTC CGATTTTGTG TTGACCAGAT TATTGATGAG ATTTTTGACA GGGTGGTTTC CGGCTGGTGA
|
Protein sequence | MLKAAAPIIT LFVLVLATLQ GCYSFAGSSL PAHLKTIAIP VFEDRSAAGI AQLRGELTGS LVNRIESQSP LRVTPSLARA DALLEGALIS FSDAPSQLSS ITERAMTNRV TLVVQVTMVD RVKKTAMFTQ SFVGFSDYRT GDPVGQQEAL RFCVDQIIDE IFDRVVSGW
|
| |