Gene Ppha_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2287 
SymbolileS 
ID6462074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2364529 
End bp2367786 
Gene Length3258 bp 
Protein Length1085 aa 
Translation table11 
GC content50% 
IMG OID642728476 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002019099 
Protein GI194337305 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00241936 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTTA AATTTGTCGA GTATCCCTCA AATGTGCCTT ACAGTACGGT AGAGGCGGAG 
GTTTTAGCAT ATTGGAATGA ACACGGGATT TTTCACAAGT GCCTTGAAGA AAAACCGGGA
GACCGGCTGT ACTCTTTTTA TGAAGGTCCT CCAACGGTAA ACGGCAAGCC GGGTGTTCAC
CATGTATTCA GCCGTACCAT AAAGGATGTT GTCTGTCGCT ACAAAACCAT GCAGGGTTAC
CGGGTGCCGC GCAAGGCTGG CTGGGATACG CATGGATTGC CGGTAGAGAT TTCGGTGGAG
AAGAAGCTTG GCCTGAAGAA TAAGGCGCAG GTTGTTGCCT ATGGCGATGG CGAGTTTAAT
GCTGAGGCTA AAGCGCTGGT TTACCATCAC ATTGATGATA ATCGCGAAGG GTGGGGAAAG
CTGACCGAGC GGATGGGCTA CTGGGTCGAT ATGGAGCACC CTTATATTAC CTGTACCAAT
GACTATATCG AGTCGGTCTG GTGGGCGCTG AAAACCATCT TCGATAAAGG ACTTATCTAC
AAAGATTATA AAATTGTTCC TCAGGATCCC AAGTCGGAGA CGGTGCTGAG TTCTCATGAG
CTTGCCCTTG GCTATAAAGA GGTGACTGAT CCGAGCATTT ATGTAAAATT CAGGCTCAGG
GACTCTGTTG ACTCCTTGCT GGTCTGGACA ACGACACCAT GGACATTGAT TTCAAATGTG
GCCCTTTGTG TGGGTTCCGA TATTGATTAT GTAAAGGTTT CCCATCGTGA GAGCGGAGAG
ACGCTGATTC TTGCCAAGTC GCGCCTGCAG GTGCTGCTCG AAAAGAATGA TGCCGGAGAA
TCGCTCTGGA CGGTTGTTGC TGAACTGAAA GGTCGGGATC TGGAGGGGCT TGACTACGAG
CCGCTTTTCG ACTACATGCA TCCTGAAAAA AAGTGCTGGT ACGTTACCTC AGGTTCTTTT
GTTTCAACCG AGGATGGTAC CGGTATTGTG CATATTGCCC CGGCTTTCGG CGCTGATGAC
TATGAGATTG CCAAAAAATA TGATCTGCCG ATGCTCCAGC CGGTTGGCCG GAACGGCTGC
TTTACGGCCG AGGTGAGCGA TTATGATGGC ATGTTTTTCA AGGATACCGA TCCGCTTGTG
ATCCGTCAGC TCAAGGATGC GGGAAAATTG TACCGCAAGG AGATGATCAC CCACACTTAT
CCTTACTCCT GGCGTTATGA TGTTCCGGTG ATCTATTATG CACGGGAGTC ATGGTATATC
CGGACGACCG CCATTGCCAA CCGTATGGTG GAACTCAACA AAACCATCAA CTGGTGCCCT
CCCGAGATTG GTACAGGGCG TTTCGGTAAC TGGCTTGAGG ATAACAAGGA CTGGGCGCTT
TCACGAGAGC GCTTCTGGGG GTCGCCACTG CCGCTCTGGG TTTCGGAGGA TTTTGCTATT
GGTGACGATG CTGCTTCGGG CAAGATGTTT GCTGTTGGTT CCGTTGCAGA GCTGCGCGAG
GGATTTATTG ATATTGAGGA CGAACAGTGC AGGCTTGGAG ATGCGCTCGA TCGGGGAGCG
GTGGAGCTTG ATCTGCACAA GCCTTTTGTG GACAGGATTT ATTTTATCAG GGATGGCAAA
CGCTTCAACC GTACGCCTGA GCTGGTTGAT GTCTGGTTCG ACAGCGGCTC CATGCCGTTC
GCTCAACTGC ACTATCCTTT TGAGCATCGC GAAGAGTTCG ATGCCTCCTT TCCGGCTGAT
TTCATTGCTG AAGGGGTCGA TCAGACCCGA GGGTGGTTCT ACACCCTGCA CGCCATTGCA
ACGCTGATTT TTGATAAACC GGCGTATAAA AATCTTATCG TGAATGGCCA TATTCTTGAC
AAGAGTGGTC AGAAAATGTC GAAGTCGAAA GGGAATGTGG TTGATCCTTT TGAGACGATG
GAGCGCTATG GCGCCGATGC CCTTCGCTGG TACCTGCTTG TGGCCAGCCC TCCCTGGAGG
CCAAAATCGT TTAATTCTGA TGAGATTGAG GAGGAGCAGC GCAAGTTTTT CCGCGCCTTC
ATCAACAGCT ATAATTTTTT TGTGCTCTAT GCCAATGTTG ATCGCTTTAC CTTCGCTGAG
CCGATTATTC CCGTTCAGGA GCGTTCAGAG CTTGACCGGT GGGTACTCTC TTGCCTGAAC
TCGCTTGTTG ATGCGGTTCA TATGCGTATG GAGCAGTATG ATTTGACCGG GGCAGTGCGG
TTGATCAACG ACTTTACGGT TGATGATCTT TCAAACTGGT ATATCCGCCG TTCACGAAAA
CGGTTCTGGA AAAGTGACAT GGGGCCAGAC AAGATTGCGG CCTATCAGAC GCTCTACGGT
GTTCTTGAGA CGCTTTCGAA ATTGCTTGCT CCCTTTACCC CCTTTCTTGC CGAGCGGATT
TTCCTGAACC TGAACAGAGT CAGTGGACTT GATTCTGCGG AGTCTGTTCA TCTTGCCGAT
TTTCCGCTGC TTGATCTTTC GGCCATTGAT CGTCCGCTTG AACAGCGCAT GAAAAAAGCG
CAGATTATCA CCTCGCTTGT GCGGACTATG CGCGAAAAGG CTTCGATCAA GGTGCGTCAG
CCGCTCAAAC GTATCCTGCT TGCAGTCAGT GACGCTGCTG CAAGGGAAGA GTACGCACTG
GTTGGTGCTA TCATCATGGA AGAGGTCAAT GTCCAGAAGA TAGAGTATAT CGAAGAGGAA
GGCTCGGTCA TCAGCAAGAA GGTAAAACCC AACTTCAAAA CCCTTGGTCC CCGTTTTGGC
AAAGAGATGA AAGCGCTGGC CGAGGCGATC AGGGTCATGA GCCATAAACA GATTGCGCAT
CTTGAAAAAG AGGGTCAACT GTCGCTTGAG CTTGATGGCA GGATTTTTGA ACTTCTGCGT
GAGGATGTTG AGATCATGCA CGAAGATATC GAGGGGTGGC TGGTAGCCTC TGATGAAGCC
AATGGCATTA TGGTCGCACT GGATACCGAG ATGACTGAAG AGCTTGAAAT GCAGGGACTT
TCGCGAGAGC TGGTCAGCCG AATCCAGGCG CTTCGCAAGG AGAGCGGCCT CGACATTACC
GACCGCATTG CGCTCTCTCT TCAGGGCTCG GAAAAAGTAC TTGATGCGGT GAAGGGTAAT
GAACCCTATA TCAAGGCGGA AACTCTTGCC ACAACCCTTG TTGTTGCAGC ATTTGACCCT
TTCTCTCTGC CTCAAGGGAA GGAGGAGAAG GTCAATGGTG AAATCTGTTG GTTATCGCTT
GAAAAATATG ATAGTTAA
 
Protein sequence
MDVKFVEYPS NVPYSTVEAE VLAYWNEHGI FHKCLEEKPG DRLYSFYEGP PTVNGKPGVH 
HVFSRTIKDV VCRYKTMQGY RVPRKAGWDT HGLPVEISVE KKLGLKNKAQ VVAYGDGEFN
AEAKALVYHH IDDNREGWGK LTERMGYWVD MEHPYITCTN DYIESVWWAL KTIFDKGLIY
KDYKIVPQDP KSETVLSSHE LALGYKEVTD PSIYVKFRLR DSVDSLLVWT TTPWTLISNV
ALCVGSDIDY VKVSHRESGE TLILAKSRLQ VLLEKNDAGE SLWTVVAELK GRDLEGLDYE
PLFDYMHPEK KCWYVTSGSF VSTEDGTGIV HIAPAFGADD YEIAKKYDLP MLQPVGRNGC
FTAEVSDYDG MFFKDTDPLV IRQLKDAGKL YRKEMITHTY PYSWRYDVPV IYYARESWYI
RTTAIANRMV ELNKTINWCP PEIGTGRFGN WLEDNKDWAL SRERFWGSPL PLWVSEDFAI
GDDAASGKMF AVGSVAELRE GFIDIEDEQC RLGDALDRGA VELDLHKPFV DRIYFIRDGK
RFNRTPELVD VWFDSGSMPF AQLHYPFEHR EEFDASFPAD FIAEGVDQTR GWFYTLHAIA
TLIFDKPAYK NLIVNGHILD KSGQKMSKSK GNVVDPFETM ERYGADALRW YLLVASPPWR
PKSFNSDEIE EEQRKFFRAF INSYNFFVLY ANVDRFTFAE PIIPVQERSE LDRWVLSCLN
SLVDAVHMRM EQYDLTGAVR LINDFTVDDL SNWYIRRSRK RFWKSDMGPD KIAAYQTLYG
VLETLSKLLA PFTPFLAERI FLNLNRVSGL DSAESVHLAD FPLLDLSAID RPLEQRMKKA
QIITSLVRTM REKASIKVRQ PLKRILLAVS DAAAREEYAL VGAIIMEEVN VQKIEYIEEE
GSVISKKVKP NFKTLGPRFG KEMKALAEAI RVMSHKQIAH LEKEGQLSLE LDGRIFELLR
EDVEIMHEDI EGWLVASDEA NGIMVALDTE MTEELEMQGL SRELVSRIQA LRKESGLDIT
DRIALSLQGS EKVLDAVKGN EPYIKAETLA TTLVVAAFDP FSLPQGKEEK VNGEICWLSL
EKYDS