| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2213 |
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| Symbol | |
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| ID | 6460967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2294648 |
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| End bp | 2296873 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728403 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_002019027 |
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| Protein GI | 194337233 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0128694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA CAGCAAAAAT TATCTATACC AAGATCGATG AGGCTCCTGC TTTGGCGACC
TACTCTCTCC TTCCCATTCT CAATGCATTT GCGAGGGGTA CTGGCGTTGA TTTTGAGCCC
AGGGATATCT CACTTGCAGG AAGAATTATT GCAAACTTTC CTGAAAATCT GACTGAAAGC
CAGAGAATAC CCGATTACCT TGCTGAACTG GGTGCTCTTG CACTGACTCC CGAAGCAAAT
ATCATCAAGC TGCCGAATAT CAGTGCCTCA ATTCCCCAGT TGAGAGCCGC TATCAAAGAG
CTTCAGGAGC ATGGTTACAA CATCCCTGAT TATCCTGAAG CGCCTGCAAA TGAAGCAGAA
AAAGAGCTTC AGACAAGGTT TGCCAAGGTT CTTGGCAGCG CTGTAAACCC GGTTTTGCGT
GAGGGAAATT CCGATCGTCG GGCGCCGCTT TCGGTAAAAG CCTTTGCACA GAAAAATCCG
CACAAGATGG GCGCATGGAG CAGCGACTCC AAATCACATG TCGCCTCAAT GAGTGCCGGT
GATTTCTATG GCAGTGAAAA GTCTGTTACG GTGGGCGAAG CAACCGCAGT TACCATAGAG
TTTGTCGACA ATGCAGGTCA GTCAACCGTT CTGAAAGAGA ATACTCCGTT ACTTGCCGGT
GAGATTATTG ATACATCCGT TATGAATGTT CGCTCACTCC GCAACTTTTT TGAAGCGCAG
ATTGCCGATG CAAAAGCTAC CGGTGTGCTG CTTTCGCTGC ATCTGAAAGC CACCATGATG
AAGGTCTCTG ATCCCATCAT GTTCGGTCAT GCCGTTACCG TTTTTTATAA GGATGTGTTT
GAAAAACATG CCGCACTTAT CAAAGAGCTT GGCGTGAATG TGAACAATGG TCTTGGTGAC
CTCTATGCCA AAATCCAGAA ACTTCCTGAG GCACAAAAAG CTGAAATTGA AGCTGATATC
AATGCCGTTT ATGCCAACCG TCCGGCACTT GCCATGGTTG ATTCCGACAA GGGTATCACC
AATCTTCATG TTCCGAATGA TATCATTGTT GATGCATCCA TGCCCGTGGT TGTTCGTGAT
TCCGGCAAGA TGTGGGGCCC TGACGGCAAG CTTCACGATA CGAAAGCCAT GATTCCCGAC
CGCTGCTATG CAACCATGTA TCAGGCCATC ATTGAGGATT GTAAACAACA TGGCGCCTTT
AATCCGGCAA CCATCGGCAG TGTGCCAAAC GTTGGGCTTA TGGCTCAGCA GGCAGAAGAG
TACGGTTCAC ACAACAAGAC CTTTGTAGCG CCCGCAAACG GGACAATTAA TGTTGTTGAT
GCTGCTGGCC AGACCGTGCT CGCACAGGCT GTTGAAGTGG GTGACATTTT CAGGATGTGC
CAGGCAAAGG ATGCTCCGGT CAAGGATTGG GTAAAACTTG CCGTCAAGAG GGCAAGAATA
ACCGGAGTGC CTGCAATTTT CTGGCTCGAC AGCAAGAGGG CTCATGATGC AGAGATCATC
AATAAAGTGA CAGAATATCT CAAGGAGCAC GACACCACCG GTCTCGATAT CCGTATCCTG
ACTCCGGTTG AGGCCATGCG TTTCTCTCTT GAAAGAATCA GGGCAGGCAA GGATACCATC
TCGGTCACCG GTAACGTGCT TCGCGATTAT CTTACCGATC TCTTCCCGAT CATCGAGCTT
GGCACCAGTG CCAAGATGCT TTCGGTTGTA CCTCTCATGA ACGGTGGCGG TCTGTTTGAG
ACCGGTGCAG GCGGATCCGC TCCAAAACAT GTGCAGCAGT TCCAGAAAGA GGGCTATCTG
CGCTGGGACT CCCTCGGAGA ATTTTCAGCA ATTGCCGCAT CGCTTGAGCA TGTGGCCCAA
TCGTTCAGCA ACGACAAGGC AAGGATTCTG GCCGAGACTC TCGATCAGGC CATTGGCAAG
TTCCTCGACA ACGACAAGTC ACCAGCCCGT AAAGTTGGCC AGATCGATAA CAGGGGAAGC
CACTTCTACC TTGCACTCTA CTGGGCAGAG GCGCTTGCCG CACAGCAGGA AGATCAGGAA
CTGCAGAGCC GTTTTGCCGC TGTTGCACAG CAACTTGGCG ACAATGAAGC AAAAATCAAC
GAAGAGCTGA TTGGCGCACA GGGAAAACCA GTCGATATGG GTGGCTATTA CAACCCGGAT
GAAGCCCTGA CGACACAGTC CATGCGTCCC AGCGCCACCT TTAACGCTAT TATTGACGTC
CTCTGA
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| Protein sequence | MAKTAKIIYT KIDEAPALAT YSLLPILNAF ARGTGVDFEP RDISLAGRII ANFPENLTES
QRIPDYLAEL GALALTPEAN IIKLPNISAS IPQLRAAIKE LQEHGYNIPD YPEAPANEAE
KELQTRFAKV LGSAVNPVLR EGNSDRRAPL SVKAFAQKNP HKMGAWSSDS KSHVASMSAG
DFYGSEKSVT VGEATAVTIE FVDNAGQSTV LKENTPLLAG EIIDTSVMNV RSLRNFFEAQ
IADAKATGVL LSLHLKATMM KVSDPIMFGH AVTVFYKDVF EKHAALIKEL GVNVNNGLGD
LYAKIQKLPE AQKAEIEADI NAVYANRPAL AMVDSDKGIT NLHVPNDIIV DASMPVVVRD
SGKMWGPDGK LHDTKAMIPD RCYATMYQAI IEDCKQHGAF NPATIGSVPN VGLMAQQAEE
YGSHNKTFVA PANGTINVVD AAGQTVLAQA VEVGDIFRMC QAKDAPVKDW VKLAVKRARI
TGVPAIFWLD SKRAHDAEII NKVTEYLKEH DTTGLDIRIL TPVEAMRFSL ERIRAGKDTI
SVTGNVLRDY LTDLFPIIEL GTSAKMLSVV PLMNGGGLFE TGAGGSAPKH VQQFQKEGYL
RWDSLGEFSA IAASLEHVAQ SFSNDKARIL AETLDQAIGK FLDNDKSPAR KVGQIDNRGS
HFYLALYWAE ALAAQQEDQE LQSRFAAVAQ QLGDNEAKIN EELIGAQGKP VDMGGYYNPD
EALTTQSMRP SATFNAIIDV L
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