Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2167 |
Symbol | |
ID | 6462080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2249533 |
End bp | 2251230 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642728363 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_002018987 |
Protein GI | 194337193 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATCTG ATACCATAAA AACAGGGTTT GAAAAAGCGC CGCACCGCAG TCTTCTTAAA GCTACCGGTT CTATTGTCTC AAATAATGAC TTTAAAAAAC CCTTTATCGG GATCTGTAAC TCCTATAACG AACTCATCCC GGGCCACTCC CACCTGCAGG AGCTGGGTCG CATCGCAAAA GAGGAGGTTC GTAAAGCAGG AGGAGTGCCT TTCGAGTTCA ATACCATCGG GGTATGCGAC GGCATTGCAA TGGGCCATAT CGGTATGCGC TACTCGCTTG CAAGCCGTGA ACTGATAGCC GACAGTGTCG AAACCGTTGC ACAAGCCCAC TGCCTCGACG GGCTTGTCTG TATTCCAAAC TGCGACAAAA TCACTCCTGG CATGATGATG GCCGCGCTGC GCATCAACAT CCCGGTTATC TTTGTCTCCG GCGGCCCCAT GAAAGCCGGC CACACCCCTT CAGGTCAAAC GGTTGACCTG ATCTCGGTCT TTGAAGCTGT CGGCCAGTTC AGCGCCGGTA AAATCGGCAA CGAAGAACTT GAATCCATTG AAGAGAGCGC CTGCCCGGGT TGCGGCTCCT GTTCGGGCAT GTTCACCGCA AACTCAATGA ACTGCCTCAG TGAAGCGCTT GGCTTTGCCC TGCCCGGCAA TGGCACCATC CTCGCCATTG ATCCACGGCG CAACGAGCTG GTCAGAGAGG CCTCCCGCCG CATTATTGAT CTCGTTAAAA AAGATATCAA GCCACGCGAT ATTCTCTCGC GCAACGCCCT GCTCAACGCT TTTGCCCTTG ATTTCGCAAT GGGAGGCAGC ACCAACACCA TCCTGCATAC ACTCGCCATT GCAAACGAAG CTGAGCTCGA TTTTAATTTT TCTGAGTTGA ACGCCCTTTC AGCCAAAACA CCCTATATCT GCAAGGTCAG CCCTGCAACA ATGGCTGTCC ATATCGAAGA TGTAGACCGG GCAGGTGGTG TATCGGCTAT CCTTCATGAG CTCAGCAGAA TTGACGGACT GCTTGACCTC TCCACCTTAA CCGTAACCGG CAAAACACTT GGCGAAAACA TCGCCGACGC AGAGATTCTT GACTACACCG TCATCAGAAG TATTGACGAA CCCTACTCCG CAACGGGCGG CCTTGCCGTT CTTTTCGGAA ACCTTGCTCC GCAGGGAGCC GTGGTCAAAA CCGGTGCAGT AGCCCCTGAG ATGATGAAGC ATACCGGTCC GGCGAAAATC TATGACTGCC AGGACGACGC CATCAAAGGC ATTATGGGTG ATGATGTCAA GGCCGGAGAT GTGGTCGTGA TCCGCTATGA AGGCCCTAAA GGAGGTCCCG GAATGCCGGA AATGCTCTCT CCCACCAGCG CCATCATGGG CCGCGGGCTT GGAGAGTCGG TTGCACTCAT TACCGACGGA CGCTTCTCAG GAGGATCAAG AGGAGCCTGT ATAGGCCATA TTTCTCCCGA AGCTGCCGAG CGCGGCCCGA TTGCCGCTTT GCATAACGGT GACTTAATCA CCATTGATAT TCCGTCAAGG AGCATCTCGG TCAATCTGAC CGAAGAAACG ATCAATGAGC GGCTGGCAGC GCTAAAGCCG TTTGAACCAA AAATAAAAAA AGGATATCTG GCCAGATATG CACAAATGGT CACCTCTGCC AATACCGGAG CAATCCTGAA AAATCCTGTT TCCTGTGAAC CTAAATAA
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Protein sequence | MRSDTIKTGF EKAPHRSLLK ATGSIVSNND FKKPFIGICN SYNELIPGHS HLQELGRIAK EEVRKAGGVP FEFNTIGVCD GIAMGHIGMR YSLASRELIA DSVETVAQAH CLDGLVCIPN CDKITPGMMM AALRINIPVI FVSGGPMKAG HTPSGQTVDL ISVFEAVGQF SAGKIGNEEL ESIEESACPG CGSCSGMFTA NSMNCLSEAL GFALPGNGTI LAIDPRRNEL VREASRRIID LVKKDIKPRD ILSRNALLNA FALDFAMGGS TNTILHTLAI ANEAELDFNF SELNALSAKT PYICKVSPAT MAVHIEDVDR AGGVSAILHE LSRIDGLLDL STLTVTGKTL GENIADAEIL DYTVIRSIDE PYSATGGLAV LFGNLAPQGA VVKTGAVAPE MMKHTGPAKI YDCQDDAIKG IMGDDVKAGD VVVIRYEGPK GGPGMPEMLS PTSAIMGRGL GESVALITDG RFSGGSRGAC IGHISPEAAE RGPIAALHNG DLITIDIPSR SISVNLTEET INERLAALKP FEPKIKKGYL ARYAQMVTSA NTGAILKNPV SCEPK
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