Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2091 |
Symbol | pheT |
ID | 6462770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2175670 |
End bp | 2178081 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642728286 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_002018915 |
Protein GI | 194337121 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00819338 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT CTGTCAGTTG GCTCAAAGGT TTTCTTCCCT CCTTTTCTTC CGATACGCTG TCACTTGTTG AAAAACTGAC CTTTCTCGGC TTTGAGGTGG AGGAGGTTCA GGAGCCCTCC CTTCCAGATG ATCTTGTTGT TGTGGGACGA ATAGAAGAGG TGGTGCAGCA TCCCAATGCT GAACGCCTGA CTATTTGCCG GGTTGATGTC GGTCGTGAAG AGCCTCTTCA GATTGTGTGC GGCGCTCCGA ATGTCAAAGC AGGAATGGTT GTTCCTGTAG CGACACTCAA AGCAAAACTG ACCGCTTCTG ATGGCCAGAC CATCACCATC AAGCCCTCGA AAATACGCGG TGAACGCTCG TTCGGCATGA TTTGTGCCGC TGACGAACTT GGGCTCTCTG ATGACCATTC AGGCGTTATG GAGCTTGACT CTTCATGCCG GATCGGTGAG CCTGTAGCCC GTTATTTTGA TGGCGATGTC GTGCTTGATA TTGCCGTGAC ACCAAACAGG CCCGACGTTC TCTCCCATCT CGGAATAGCA CGGGAGCTTG CAGGAGGTGA AGAGATACAC TATCCGGAAC AGAACGCAGT ACCATTTGTA CAAACTGGGA CGCTTGTTGA TGTTCTGGAT GCTGTCGCCT GCCCCTATTA CACGGGTGTG GTCATAAGAG GGATAACGGT TGCCGAGTCT CCTGCATGGC TTCGAAAAAA GCTTGAAAGT ATTGGTTTGA GGCCGAAAAA CAACATCGTT GATATCACCA ACTATATTCT TCACGGGTTG GGCCAGCCCC TTCATGCCTT CGATCTTCAA AAGCTTGCCG GTGAGCGGGT TGTAGTGCGG AGTGATGTGC GTGGGGAATT TGTTGCCATC AATCAGCAAT CCTTCCAGGT TGAGCCCGGT ATGCCGGTTA TCTGTGACAG CCAGAAGCCA GTGGCTCTTG CCGGCGTTAT GGGAGGACTT GAGTCAGCCG TAAGTGACGC CACAACCGAT ATTCTGCTTG AGTCAGCCTG GTTTGATCCC TCTATGATCC GGAAATCGGC AAAAAAAGCT GCGATCTCTT CGGATGCCTC ATACCGTTAC GAGCGGGGTA TCGACCCCCG GAATGTCAGA CGGTCGGCAG AGTGCGCCGT AGCATTGATT CTGGAGCTTG CCGGAGGCCG TATTGAAGAG GCTCAGGAGT GGGGTTCAGT GCCGGCTGAA TTGCGTCGCG TAGCCCTGAG AGCTGATCGG GTCAACGCCT TGCTTGGCAG TTCGATAGCC GCAGGCGAAA TGGTGGCGAT GCTCCAGCGG ATTGGATTCA GGACTGACGA AACCGAAGGG GAATCAATCA CCTTCGAGGT GCCTTCCTGC AGGGTCGATG TTTCAGGGGA GATCGATCTT GTCGAGGAGA TTGCCCGCCT CTATGGTTAC GACAATATTC AGCCTTCTGC CCAGATGGCG ACCATCTATC CACAGTCGCG CAAGTTCCCG GAGTTTTTCC CGGATTTTCT CCGCTCTCTC ATGGTCGGCT TGCATTTCCG CGAAATTCTC ACCAATCCGC TTGTGAAAAG AGAAGAGGCC GCTCTGTTCA GCGACAAGCT TGTTGGTGTG CTTAATCCTA TCAGTGAGGG GCTTGAAGTA CTTCGTCCCG CGCTTGTTCC CGGATTTCTG AAGGTTATAA GCCATAATAT CAGGCATGGA AACCGGGATC TTCAACTCTT TGAGGTAGCC AGGGGATTTC AAAGTCTCGC AGCAGGTGAG TGCAGGAGTG AGTCGCCGCT TGATGCTTAC AGTGAACAGG AATATCTTGT TCTTGCCATC ACTGGCAGTC GTTTCCCGAG AATCTGGAAC CAGTCGTCAG AAAAGGTTGA TTTTTACGAT CTTATGGGCG CTGTCGAGAT GCTGCTCGAG AAGCTGAATT TGCTTGATAA ATCAGTGGTG AATATTTATA ATGAAAACAC TGTCAGCATT GATGTACAGT TGACAGAAAA GGGAAGAAGT TGCTCGTACA GGGCAGGTGT TGTACAGCGA CTCGATTCAA ACCTCTTGGG CAAATTTGAT ATTGGACAGG ATGTTTATAT AGCGGAACTT GACGCGGCAG CTCTCGAAAG CTGTTTCAGT TCAGGTGTCA CCTATGAGCC GCCTTCCAGA TTTCCGGTTG TTCAGAGGGA TATATCGCTT GTTCTGCCTC CTGATGTTAC TGTTCAGTCA CTTGTTGAAT TGGTTCGTTC AAGTGACTCC CTGATCAGGG GTGTCTCTGT TTTTGATCTT TTCGAGCGTA CCCGTGAGGA TGGCGGAGAG CGTAGCGTTG CACTCTCTCT TGAAATTGCA GATCATGCAG GGACGCTACA GGATGAAAGA ATCAGCGATA TTCTTTCTAA AGTCGGCAGT AATGCCGCGA GTAAGCTTGG TGCGGTTATT CGACAAGTCT GA
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Protein sequence | MKISVSWLKG FLPSFSSDTL SLVEKLTFLG FEVEEVQEPS LPDDLVVVGR IEEVVQHPNA ERLTICRVDV GREEPLQIVC GAPNVKAGMV VPVATLKAKL TASDGQTITI KPSKIRGERS FGMICAADEL GLSDDHSGVM ELDSSCRIGE PVARYFDGDV VLDIAVTPNR PDVLSHLGIA RELAGGEEIH YPEQNAVPFV QTGTLVDVLD AVACPYYTGV VIRGITVAES PAWLRKKLES IGLRPKNNIV DITNYILHGL GQPLHAFDLQ KLAGERVVVR SDVRGEFVAI NQQSFQVEPG MPVICDSQKP VALAGVMGGL ESAVSDATTD ILLESAWFDP SMIRKSAKKA AISSDASYRY ERGIDPRNVR RSAECAVALI LELAGGRIEE AQEWGSVPAE LRRVALRADR VNALLGSSIA AGEMVAMLQR IGFRTDETEG ESITFEVPSC RVDVSGEIDL VEEIARLYGY DNIQPSAQMA TIYPQSRKFP EFFPDFLRSL MVGLHFREIL TNPLVKREEA ALFSDKLVGV LNPISEGLEV LRPALVPGFL KVISHNIRHG NRDLQLFEVA RGFQSLAAGE CRSESPLDAY SEQEYLVLAI TGSRFPRIWN QSSEKVDFYD LMGAVEMLLE KLNLLDKSVV NIYNENTVSI DVQLTEKGRS CSYRAGVVQR LDSNLLGKFD IGQDVYIAEL DAAALESCFS SGVTYEPPSR FPVVQRDISL VLPPDVTVQS LVELVRSSDS LIRGVSVFDL FERTREDGGE RSVALSLEIA DHAGTLQDER ISDILSKVGS NAASKLGAVI RQV
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