| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2065 |
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| Symbol | |
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| ID | 6462820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2155030 |
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| End bp | 2156427 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728259 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002018889 |
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| Protein GI | 194337095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.145613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTGC CTGATTTTTT TGACGATAAT CGCCATAACC CTGCGGGAGC ATCAGGAAGA
GAACAGCCCG ACCTTGATGG TCTTGATTCC ATGTTTGATT CGGAGGATCT TCTTGACCGA
ATCAGTCAAT ATAATGAAGA GGGGTTTCAG CTTGAAGCAC TTGCTGTAGC CCGTCGTCTT
GAAGAGATAG CGCCTTTTAA TACGGAAACC TGGTTCCATC TGGGTAATTG CCTGACGCTG
AACGGTTTTT TTGATGATGC ACTTGAAGCG TTTCAGCGGG CGGCCGTCTT CAGTCCCATG
GACAGCGAAA TGCGGCTGAA TCTCGCTCTT GCCTGGTTCA ACACCGGTAA TCATGATGAA
GCGCTCAGAG AACTCGAAGA TATTCTTGTT GACTCCTCCA TTGAAAAGGA GTTCCATTAC
TATCGCGGAA TTATCCTGCA GCGTCTTGAA CGGTTTGTGG AGGCCGAATC GGACTTTGAA
TATGCATTGC AACTTGATGA CGAGTTTGCT GATGCATGGT ATGAACTTGC CTACTGCAAA
GATGTTCTTG GCAAACTTGA GGAGAGCACC TCATGTTACC GCAAAACACA CGATTATGAT
CCATACAATA TCAATGCCTG GTACAATAAT GGCCTGGTAC TGAGCAAAAT GAAAAGCTAT
GACGAGGCGC TTGACTGTTA CGATATGGCC ATCGCCATCT CCGATGATTT CAGTTCGGCT
TGGTATAACC GTGCAAACGT TCTTGCCATC ACCGGACGTA TTGAGGAGGC TGCTGAAAGC
TATCTGAAAA CGCTGGAATA TGAGCCCGAT GACATTAATG CGCTCTATAA TCTCGGCATA
GCCTATGAAG AGCTGGAGGA GTATACCGAA GGCATCATCT GTTATCGGCG CTGTATCGAG
ATCAGCAGTG ATTTTGGTGA AGCATGGTTT GCACTTGCCT GCTGCCATGA AGCGCTTGAA
GAGTACGAAG AGGCATTTAC AGCAACTCTG GAAGCGCTGA AATCAATACC CGACAGCATT
GAGTTTCTGC TGCTGAAAGC GGAGATCGAG TACAATCTCA ACGATCTTGA AAATTCCATG
GCAACTTACC GGCAGGTCAT AGCGCTTGAT CCGGAAAGTC CCCAGATTTG GGTTGATTTT
GCCATCGTTC TCAGGGAAGG TGGCCAGATC AATGCATCAA TCGATGCACT GCAGCAATCA
TTGAAGCTAC AGCCACTTTC GGCTGATGCT CACTTTGAAA TTGCCGCTGC CTATTTTGCC
ATGGGCGACA AACTCAGTAC CCTGAAGGCA CTAAGCAAGG CATTCAAAAT TGACCCCGAG
AAAAAAGAGC TTTTTCAGAG CACTTTTCCG GAACTGTACC AGCAGGATTC TGTCAGACGG
ATGCTCGGGA TTGCATGA
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| Protein sequence | MNVPDFFDDN RHNPAGASGR EQPDLDGLDS MFDSEDLLDR ISQYNEEGFQ LEALAVARRL
EEIAPFNTET WFHLGNCLTL NGFFDDALEA FQRAAVFSPM DSEMRLNLAL AWFNTGNHDE
ALRELEDILV DSSIEKEFHY YRGIILQRLE RFVEAESDFE YALQLDDEFA DAWYELAYCK
DVLGKLEEST SCYRKTHDYD PYNINAWYNN GLVLSKMKSY DEALDCYDMA IAISDDFSSA
WYNRANVLAI TGRIEEAAES YLKTLEYEPD DINALYNLGI AYEELEEYTE GIICYRRCIE
ISSDFGEAWF ALACCHEALE EYEEAFTATL EALKSIPDSI EFLLLKAEIE YNLNDLENSM
ATYRQVIALD PESPQIWVDF AIVLREGGQI NASIDALQQS LKLQPLSADA HFEIAAAYFA
MGDKLSTLKA LSKAFKIDPE KKELFQSTFP ELYQQDSVRR MLGIA
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