Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2051 |
Symbol | |
ID | 6462838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2142372 |
End bp | 2144921 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642728245 |
Product | (NiFe) hydrogenase maturation protein HypF |
Protein accession | YP_002018875 |
Protein GI | 194337081 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGAG TGGCTCGAAA AGAAACTGTT ACAGCACTGA GCATCAAGGA GAGCAGCGCT GAAGAGCGGA GGCGTCTTCG GGTCAACGGT ATGGTACAGG GTGTGGGGTT CCGCCCTTTT GTTTACCGTC TGGCTGTTGC TTGTGACCTG AAAGGGTTTA TCTGCAATAC AGCCTCTGGT GTGCTGATTG AGGTGCAGGG TCAACTCTCG CTTCTCAATG AGTTTTCGCG TCGTTTGCTG GGGGAGCGCC CGCCGCTTGC GTTCATCGAA ACCATCGAAG AGATGTCTCT TCCCTGTGTT TCAGAAGAGG CTTTTCTGAT CGGGAATTCG GGTTCCGGCG TTGGGGTCGA AACACTCATT CCGCCCGATA TTGCGCTTTG CAGTGATTGC CGACGAGAGC TTCTGGATCC TGCCAATCGC CGGTTTCGTT ATCCTTTCAT CAACTGTACC AATTGCGGTC CCCGCTATAC CATTGTCGAT CGGTTGCCCT ACGACCGTCC ATTTACCTCC ATGCATGGGT TTACCATGTG TGAAGCGTGT GAGCGCGAGT ATCATGACCC GCTTGATCGT CGGTTTCACG CACAGCCCAA TGCCTGTCCG GTTTGCGGCC CCACTCTTTC CTTGTTTGAT GCTTCAGGTA CGCTCCTTTT GGGGGAGAGT GTCGTGGAGC ACAACCCGGT CGATGGCACT TCTCATGCAC AGCCAAAAAC CGCTTTGTCC TGTGCTCACA CCCTGTCCGG TGATGTCGTC GCCGAAGCCG TTGCTTTTCT CAGGAGAGGG ATGATTGTTG CGCTGAAAGG GCTTGGCGGT TTTCATCTTG CCGTAGACGC ACGAAATGAA GCTGCGGTAC GGCGACTTCG GGAGCGGAAA GGTCGAGAGG CAAAACCTTT TGCAGTGATG ATACGCGACA GGTCGCTTGT TCACGGCTAT TGTGAGGTCA GTGAAACGGA AATGGCCGCA CTGAGCGCTG CGCAAGCCCC CATTGTGCTT CTGAAAAAGA AAAAGAGCAG CAACCTTGCG CCATCCATAG CGCCAGGCAA TGAGCGCCTT GGCGTCATGC TGCCCTACAC GCCACTGCAC ACCCTGCTTT TCGATGAAAC TCTCGACATT CTGGTGATGA CCAGTGCCAA TTTCAGCGAG GAGCCAATTG CAAGTGAGAA TGAGGAAGCG CTTCTGCGTC TCAAGGGTAT TGCCGATGCT TTTCTCGTGC ATAACCGCCC CATCTACCTG AAATGCGATG ATTCGGTCAC CATCGCTTTA TCGGGAACGT TGCGGCAGCT CAGGCGGAGC AGGGGATATG TTCCGGCGCC AATATATCTT CGCGAAGATG GTCCGGTTGT TCTTGCTGCC GGAGGTGAGC TGAAAAATAC CATTACGATT CTGAAGGGTA GTCATGCACT GATGAGCCAG CATATTGGTG ACATGAAAAA CTATGAAGCA TACCGCCATT TTGTGCAGGT TGTTGCCCAT CTTCAGCATC TTTTTCAGGC TGTACCCAAG CTTCTGGTGC ACGATCTGCA TCCTGCCTAC ATGACAACAC AGTGGGCGAT GATGCAGAAT ATTCCCTTGC TTGGTGTCCA GCATCATCAT GCTCATCTGG TGTCATGCCT CGCTGAAAAC AGGGAGGAGG GGCCAGCGAT TGGGCTCATA CTTGATGGTA CAGGATATGG AACTGATGGC ACGATCTGGG GTGGAGAGGT ACTGATTGGG GATGCTGCCG GAGCAGCACG CTTTGCTTCA CTTGAGCTTA TGCCATTGCC GGGAGGGGAG GCCGCAGTCA TGCACCCCTG GCGGGCTGCG CTTGGCTATC TTCACCGAAG TTGTCCCGAC CTGCCCGACC TTCCCTTCAT GAAAGGACGG AGCATTGAGC CGGTTCTTGA GTTACTTCAA AAGAGGGTTA CTATTGTTGA AACCTCAAGC TGTGGCCGAC TTTTTGACGC CGTTGCCGCA CTCTGCGCTC TGCGGGGTGA GATCAGCTAT GAGGGAGAGG CCGCCATTGC ACTGATGCAT GAGGCAGGGG GGAGTATGGG CAGCAAGTCG TTCCGCTACG GGCTGCATTA TGAGCAAAAG CCTGCACTTG CGCCAGTGCA ATCCGCAGGA GGTACCATAG GCACGAACGA TATACCGGCA GTTACAGAGA GGCTGATCAA TACCCCGCGA GGAACTATCG CGAACAAGCA CGATCTGTTG CATGAGGAAA AAGGGCGCTG GACGATGCTG GTTTCGCCAA TTATCCGTGA TGTTGTCACT GCCCTGCAAA CAGGGATGGC TGCCGGTGAA ATCAGCCGGC GCTTTCACCG TACGCTTGTA AACTGTTTTT ATGAAATTAT CGGGAAGGCA TCCAAAGCGA CAGGCATAAC CACCGTAGCG CTCAGTGGAG GAGTTTTTCA GAACGCCCTC CTCTTTGAAG CCCTCGTGAC TGAACTGCAA CGTGCAGGCT ACAAGGTGCT TACCCAAGCC CTTGTGCCCT CCAACGACGG AGGCCTCTCC CTTGGCCAGG CCCTCATTGG CAGAACTTAC CTCAACGGCA ACTATCAAGG AATCCAATAG
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Protein sequence | MAGVARKETV TALSIKESSA EERRRLRVNG MVQGVGFRPF VYRLAVACDL KGFICNTASG VLIEVQGQLS LLNEFSRRLL GERPPLAFIE TIEEMSLPCV SEEAFLIGNS GSGVGVETLI PPDIALCSDC RRELLDPANR RFRYPFINCT NCGPRYTIVD RLPYDRPFTS MHGFTMCEAC EREYHDPLDR RFHAQPNACP VCGPTLSLFD ASGTLLLGES VVEHNPVDGT SHAQPKTALS CAHTLSGDVV AEAVAFLRRG MIVALKGLGG FHLAVDARNE AAVRRLRERK GREAKPFAVM IRDRSLVHGY CEVSETEMAA LSAAQAPIVL LKKKKSSNLA PSIAPGNERL GVMLPYTPLH TLLFDETLDI LVMTSANFSE EPIASENEEA LLRLKGIADA FLVHNRPIYL KCDDSVTIAL SGTLRQLRRS RGYVPAPIYL REDGPVVLAA GGELKNTITI LKGSHALMSQ HIGDMKNYEA YRHFVQVVAH LQHLFQAVPK LLVHDLHPAY MTTQWAMMQN IPLLGVQHHH AHLVSCLAEN REEGPAIGLI LDGTGYGTDG TIWGGEVLIG DAAGAARFAS LELMPLPGGE AAVMHPWRAA LGYLHRSCPD LPDLPFMKGR SIEPVLELLQ KRVTIVETSS CGRLFDAVAA LCALRGEISY EGEAAIALMH EAGGSMGSKS FRYGLHYEQK PALAPVQSAG GTIGTNDIPA VTERLINTPR GTIANKHDLL HEEKGRWTML VSPIIRDVVT ALQTGMAAGE ISRRFHRTLV NCFYEIIGKA SKATGITTVA LSGGVFQNAL LFEALVTELQ RAGYKVLTQA LVPSNDGGLS LGQALIGRTY LNGNYQGIQ
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