| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2029 |
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| Symbol | |
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| ID | 6462895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2118667 |
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| End bp | 2120313 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728225 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_002018855 |
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| Protein GI | 194337061 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5421] Transposase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.417393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGTCG ATTCCAGCAA GACCACCATT AATGGCAAAA CCTACCAGCG CCATCTTTTT
CGTGAATCCT ATCGTGAAGA TGGGAAGGTG AAAAATCGCA CGTTGGGCAA GATCTCAAAA
TGTTCGGAAG GAGAGATTGC CGCCATTAAA CTTGCCCTGA AGTACAAAGA CAATTTGGCA
GCCCTGTTGC ATATTGAGGA TGTTGAACTA CATGAGGGGC TTCGTGTTGG TGTGGTATAT
GCACTCAAAA CTCTTGCCGA GAGGCTTGGT ATCAGCAAGA CGCTTGGTAA TACCCGCCAG
GGAAAGCTTG CATTGTGGCA GATTATGGCT CGATTGATCG GGCAGGGTTC ACGACTCGGT
GCGGTCAGGA TGGCAGCAAG TTATGGCGCC TGTGATGTCC TTGAATTAGA ACGCTTTACA
GAAGATGACC TCTATGCCAA CCTGGCTTGG TTGACGGAGC ATCAGGAGCG CATTGAGCAG
CAGTTATTCA AGCACAATTC AGCGGGTGCT GGCCCGGAAT TGTTGCTCTA TGATGTTACC
TCATCATATC TTGAAGGGAT GGAGAATGTG CTTGCTGCCT TTGGCTACAA CCGGGATGGC
AAAAAGGGGA AAAAGCAAAT CGTTATTGGT TTGTTGTGTA CCGCAGATGG CGATCCGGTT
GCTGTCCGGG TCTTTGCAGG CAATACCGGC GACAAGTCAA CCGTTGCAGA GCAGATTCGC
ACCGTTGCCA ACACTTTTGG CATTGAAGAG GTAACGATGG TTGGCGACAA GGGTATGATC
AAAACGCCGC AGGCCAAAGA GTTGACCGAT GCGGGATTTT ATTACATCAC CTCACTCTCG
AAACCCGAAA TCAGAACCCT GCTGAAGGCA GAGGTACTGC AAATGGATTT TTTCGATTCA
GAGCTGTATG AGGTTGAAAA TAAAACCGAT GGCGTTCGAT ATGTGCTGAG AAGAAATCCG
GTTCGAGAGG CCGAGATGGC AAAGAATCGC CAGGAACGGG TGAAAAAAAT CCAGCGTCTT
GTTGAGGAGA AAAACAGTTA CCTCGCCGGT TCCCTCAAGC GTGACAAGGA TGTTGCACAA
CGCTCTCTTC AGAAAAAGAT CAGCCAGTAT AAGCTCAATG ATGTGCTGGA ACTGACCCAT
CAGGAGAGGG TGTTCACGGT AACGGTCAAT GAAGAAATCC TGAAAGGAGT CGCTCTGCTG
GACGGCTGTT ATGTGATCAA AACCGATGTC AAGAAAGAGC TGCTTTCGAC CGAACAAGTC
CATGATCGGT ACAAAGATCT GGCCAAAGTG GAGCATGCAT TCCGGACGTT CAAGCAAAGT
CATCTTGAAA TCAGACCGGT TCATGTGCGA ACCGAAGCGA GCACTCGTGG CAATGTCTTT
GCCGTTATGC TTGCCTATAA AATCGAGAGG CAGTTATCAG AACTCTGGAA AAAATGTGAA
TGCACGGTAC CGGAAGGAAT TGATGAACTT GGCGCAATAC GCAGCACAAT CGTCACCCTC
AAAGGGTCAA GCTGTCAGAA AATTCCCCAG TCGAAAGGAT TGGCTGCTGA GTTGCTTGCC
GCTGCCGGGA TTACCCTTCC TTCGGTCATT GATGCCAAAA ATGTTGATGT AGTCACAAGG
AAAAAACTGG CCCCGAAGCG TAAATAA
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| Protein sequence | MYVDSSKTTI NGKTYQRHLF RESYREDGKV KNRTLGKISK CSEGEIAAIK LALKYKDNLA
ALLHIEDVEL HEGLRVGVVY ALKTLAERLG ISKTLGNTRQ GKLALWQIMA RLIGQGSRLG
AVRMAASYGA CDVLELERFT EDDLYANLAW LTEHQERIEQ QLFKHNSAGA GPELLLYDVT
SSYLEGMENV LAAFGYNRDG KKGKKQIVIG LLCTADGDPV AVRVFAGNTG DKSTVAEQIR
TVANTFGIEE VTMVGDKGMI KTPQAKELTD AGFYYITSLS KPEIRTLLKA EVLQMDFFDS
ELYEVENKTD GVRYVLRRNP VREAEMAKNR QERVKKIQRL VEEKNSYLAG SLKRDKDVAQ
RSLQKKISQY KLNDVLELTH QERVFTVTVN EEILKGVALL DGCYVIKTDV KKELLSTEQV
HDRYKDLAKV EHAFRTFKQS HLEIRPVHVR TEASTRGNVF AVMLAYKIER QLSELWKKCE
CTVPEGIDEL GAIRSTIVTL KGSSCQKIPQ SKGLAAELLA AAGITLPSVI DAKNVDVVTR
KKLAPKRK
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