Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2019 |
Symbol | |
ID | 6462924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2110507 |
End bp | 2112084 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642728217 |
Product | Radical SAM domain protein |
Protein accession | YP_002018847 |
Protein GI | 194337053 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0788272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAAGCA GATTTAAAGA TAAGCCTTCA GTATTGTTGT TTTTCCCTCC AGGTTGGTCA TTAAATTATG GTGCTCCTCA TATTGGTTTG CCCATAATCA AAGGTTATCT TAGTAAATAT AATATTAGCT GTGACATTCA AGATTTAAAT ATTGAGTCTT CACGTTTTTT TGGTGTAACC CTTTCGGAAC AAAAGTTATT ATCATTAATG ACAGATTTTG ATTCGGAAAA CGCATACAAA TTCTACTTTA GTTTTTCTGA TAAACTACAA AAAATTGCAG AAAAATATAA AGGACAATGG AGAATAAAAA GTGGTTTTGT TTACGATGGG TGTGACCTAA GTTCATCAAA AGATATTGAA TATTTTTCCA AAATCGAATC ACCATTTACT AAATTTTACG AAGACAATAT CATTTCAAAG ATTAGTAACC ATAGTTATTC TATTATTGGG ATTTCTGTTA CTGTACCAAG TCAATTACTA TCTGCCTTCG AAATATCACG AATAATTAGA AAGAGCGGTT ATAAAGGAAT AATAGTTTTG GGGGGCAATA CAATAACAAG ATTAAAAGAG GAATTATTTT TAGATTGGAT TTATGATGTT GTCGATTGTA TTGTTTTAAA TCAAGGAGAA GAATCATTAA AATTAATATT TGACTCTCTA CAAAACAATG GAAAATTCGA CAACATCCCT AATCTATTAT GGCGAAAGAA TGGTAAAATT ATTTATAACG GATATAAACA TATTGAAAAA TCACAATTTT CAATGCCAAA TTTTGAAGGT TATCCAATTG GCGAATATTG GGGTATTAAT TATTTGCCAA TAATTGGTGC AAGAGGATGT TATTATGGGA AATGTAACTT TTGTTCTATC CCCTATGCTT GGGGCAATGA TGGATTTGTT GGTTTAGATA ATCCAACACA TGTATTTAAT AGTATTAATG AATCTATTCA AAAATATAAT ATTCATAATT TTAGTTTCGT TGAAGAAACT ATGCACCCAA AAACCATTAA AGAAATTGCT AAACTTGTTG CGGAGTCAAA CATTAATATA AATTTTGAGG GCTACATTCG GTTTGAGAGT ATTTGGCTTA ATGATTCTTT ATTGTTATTA CTTTCAAATT CTGGATTAAA AAAAGTGTTT ATTGGGATGG AGTTGATTTC AAATAAAAAT AGAAACAATT TAAATAAAAA TGATAATGCT AATCAGATAG TTGAATTTTT AAAAAAATTT AAAAAGTATG GAATTAAAGT GCATTTGTTT ACAATGTTTG GGTTCCCCGG TACAAATGAA CTAGATGCGA TAGACACGGT TAAGTTTTTA TTTGATAATT CAGATTTGAT TGACACAATA GATGTTTCTC ATTTTGTTTA TTCTAAACAT ACGCAAATAA ATGGAGTAAC GCCATTAATT GAAACAAGTA AAGATTGGGC TATTGAATAT GATTTTATTG CTGAAAACAG TTCTTATATT AACTCAAAAG AAGCACAAAT TTTGGCTAAT GGACTTGAAA GTATAGTGAT TCAAACCAAG CCCCAATGGA CACATCCAAT ATACAGAATG TACACAGCAT GGCAATAA
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Protein sequence | MQSRFKDKPS VLLFFPPGWS LNYGAPHIGL PIIKGYLSKY NISCDIQDLN IESSRFFGVT LSEQKLLSLM TDFDSENAYK FYFSFSDKLQ KIAEKYKGQW RIKSGFVYDG CDLSSSKDIE YFSKIESPFT KFYEDNIISK ISNHSYSIIG ISVTVPSQLL SAFEISRIIR KSGYKGIIVL GGNTITRLKE ELFLDWIYDV VDCIVLNQGE ESLKLIFDSL QNNGKFDNIP NLLWRKNGKI IYNGYKHIEK SQFSMPNFEG YPIGEYWGIN YLPIIGARGC YYGKCNFCSI PYAWGNDGFV GLDNPTHVFN SINESIQKYN IHNFSFVEET MHPKTIKEIA KLVAESNINI NFEGYIRFES IWLNDSLLLL LSNSGLKKVF IGMELISNKN RNNLNKNDNA NQIVEFLKKF KKYGIKVHLF TMFGFPGTNE LDAIDTVKFL FDNSDLIDTI DVSHFVYSKH TQINGVTPLI ETSKDWAIEY DFIAENSSYI NSKEAQILAN GLESIVIQTK PQWTHPIYRM YTAWQ
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