| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2011 |
|---|
| Symbol | |
|---|
| ID | 6462947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2102093 |
|---|
| End bp | 2103370 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642728210 |
|---|
| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_002018840 |
|---|
| Protein GI | 194337046 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA TTGACGTCAC CATATCCCAG TTGTCGGAAT CCGTTGCCGA GGCAACGCTG
CTGAACTGGA AAAAAAAGCC CGGAGACGGC GTTGTTGAAG ATGAAATATT GTTTGAAATT
GAAACCGACA AGGTGGTCTT CGATGTTCCT TCACCCGCCT CTGGCGTTCT CTTTGAAATT
CTTGTCGGCG ACGGAGGAAC GGTGGTCCCC AATCAGGTAC TGGCACGAAT CGACAGCGAA
GGCAAGGCCA CGGTTACCGC TCAGGAGGAG GCTATCCGCG AGGCAAGGGC ACCTGAACCG
ACAGCCGTAG AAGCTGAAGA GGTCATCGTC ATGCCTGCAG CGGCAAAACT GATGGCCGAA
ACCGGAATAA AGCTCTCACA GGTTGAGGGT ACAGGACGAC AGGGACGAGT GACCAAAGGC
GACGTACTGC AGGCCATTGC GACAGATGCT GAACCCTCTT CGCCACAACC ACCTCCTCAG
CCCGTGCCCA GGCCTGCACC AACACCTGCG CCCGCACCCG CACCCGCACA GAAGCCCAAA
CCGGTAGAGG CACACCTTGA AGCGCCGCTG ATGACCGATC GACCGGAACA GCGCGTCCCA
ATGACCCGTC TCAGGGCACG CATTGCCGAG CGGCTGCTTC AGTCGCAGGC CAGCAACGCC
ATTCTCACGA CCTTCAATGA GGTCAACATG CAGGGTGTGA TCGAATTGCG CAACCGCTAT
AAGGCCACCT TTGAAAAAGA GCACGGCGTA AAGCTCGGAT TTGTCTCCTT TTTTGTCAAA
GCTGCGGTGC ACGCTTTGCG CAAATATCCG GTTCTCAATG CATCGGTCGA TGGCAAGGAT
ATCATCTATC ATGGCTACTT CGACATTGGT ATTGCCGTCA GCTCTCCCAG AGGACTTGTG
GTACCCATTC TGCGCAATGC CGACCAGATG ACCATTGCCG ATATTGAACG AAAAATCGCT
GACTACTCCA CCAAAGCAAA GCTCGGCAAC CTCTCCCTCG AAGAGCTGAC CGGCGGCACC
TTCTCCATTT CCAACGGCGG CGTTTTCGGT TCGATGCTTT CAACTCCCAT CATCAATCCA
CCCCAGTCGG CCATTCTCGG CATTCATGCC ACAAAAGAGA GAGCTGTAGT GGAAAACGGC
CAGATCGTCA TACGGCCAAT GAACTATCTG GCCATGTCGT ACGATCACAG AATCATCGAC
GGCCGCGAAG CTGTCCTTGG CCTCAGTGCA ATCAAGGATG CGCTGGAAGA TCCGGCACGT
CTCTTACTTG ATCTTTAA
|
|---|
| Protein sequence | MAIIDVTISQ LSESVAEATL LNWKKKPGDG VVEDEILFEI ETDKVVFDVP SPASGVLFEI
LVGDGGTVVP NQVLARIDSE GKATVTAQEE AIREARAPEP TAVEAEEVIV MPAAAKLMAE
TGIKLSQVEG TGRQGRVTKG DVLQAIATDA EPSSPQPPPQ PVPRPAPTPA PAPAPAQKPK
PVEAHLEAPL MTDRPEQRVP MTRLRARIAE RLLQSQASNA ILTTFNEVNM QGVIELRNRY
KATFEKEHGV KLGFVSFFVK AAVHALRKYP VLNASVDGKD IIYHGYFDIG IAVSSPRGLV
VPILRNADQM TIADIERKIA DYSTKAKLGN LSLEELTGGT FSISNGGVFG SMLSTPIINP
PQSAILGIHA TKERAVVENG QIVIRPMNYL AMSYDHRIID GREAVLGLSA IKDALEDPAR
LLLDL
|
|---|
| |