| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1888 |
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| Symbol | tpx |
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| ID | 6463266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1977207 |
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| End bp | 1977707 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728099 |
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| Product | thiol peroxidase |
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| Protein accession | YP_002018731 |
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| Protein GI | 194336937 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2077] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.210029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACAGA TTACCTTCAA GGGCACTCCA GTTGAAACAG TCGGGACTCT TCCCGCCAAA
GGTTCAGAAG CTCCTTTTTT TTGTCTGGTG AAAACCGATC TCACCGAAGC CGGACCTGCT
GATTTCGGAA GTAAAAGAAT AGTTCTCAAT ATCTTTCCGA GTCTTGATAC GCCAGTCTGC
GCTGCTTCAG TCAGGCAATT CAACAAGGAG GCTTCATCGC TCGACAATAC GGTTGTGCTC
TGTATCTCCG CCGATTTGCC CTTTGCCCAC AAACGTTTTT GTGAAACCGA GGGGTTGAAA
AATGTTGTTT CGCTCTCCGT TTTTCGCTCT CCCGAATTTG GTAGGGATTA TGGTGTTACT
CTTGCTACCG GCCCTCTGAA GGGGCTTCTT TCGCGCGCCA TTGTTATTAT TGATGCTGAC
GGGATCGTGC GCTACACCGA ACAGGTGGCA GAAATTGTCG AAGAACCGGA CTACAGTGCA
GCGCTCAAGG TTCTTGCGTA A
|
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| Protein sequence | MAQITFKGTP VETVGTLPAK GSEAPFFCLV KTDLTEAGPA DFGSKRIVLN IFPSLDTPVC
AASVRQFNKE ASSLDNTVVL CISADLPFAH KRFCETEGLK NVVSLSVFRS PEFGRDYGVT
LATGPLKGLL SRAIVIIDAD GIVRYTEQVA EIVEEPDYSA ALKVLA
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