Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1864 |
Symbol | |
ID | 6463344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1954416 |
End bp | 1956050 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642728073 |
Product | proton-translocating NADH-quinone oxidoreductase, chain M |
Protein accession | YP_002018707 |
Protein GI | 194336913 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.142353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGTT TAATTGTTTT TCTGCCTATT ATTGCCGGTC TGGTAATACT TGCTGTGCCT TCATCGCAAA AGCAGATAAT CAGAATTGTT TCATTGCTTG CGGCTCTTGC CCAGGGAGTG CTGGCGGTTC TGATCTGGAG AGGTTATGAT CCTGCGCTAC CCGGAATAAC CGCTGGGCCA GGGGGAAGTC CGCTGGGCTC ATTCCAGTTT GTTGAGAGGG TTCCGTGGAT CAGTCTCAAT CTTGGTGGTT TTGGTTCACT GAACATTGAG TATTTCCTTG GTATTGATGG AATATCGGTC ACCATGGTGA TTCTGACTGC CCTTGTCTCG GCAATTGGTA TTCTTTCAAG CTGGACCATA CAGAAACAGG TGAAGGGCTA TTTTATCCTC TACAACCTGC TCGCCTCGGC TATGATGGGC TGTTTTGTAG CGCTTGACTT CTTCCTCTTT TACGTTTTCT GGGAGGTTAT GCTTCTTCCG ATGTACTTCC TTATTGGCAT CTGGGGTGGT CCTAACCGTG AATATGCAGC GATCAAGTTT TTCCTCTATA CGCTTTTTGG TTCGGTGTTC ATGCTTCTTG TCATGATCGG ACTCTATTTC AGTGTCATCG ATCCGCTGAC CGGAAACCAT ACCTTCAGCC TTGTTGCCAT GGCAAGCCAG GAAAATTATA TCAAGGATGC CATTCTCGGC CCCGATAATG TTGTGTGGCG TTATGTCGCC TTTATTGTTC TCTTTATCGG TTTTGCTATC AAGGTGCCTA TGTTTCCATT CCATACATGG CTTCCTGATG CTCACGTTGA AGCGCCGACA CCTATTTCGG TTATCCTTGC CGGTGTGCTT CTGAAGCTTG GTACCTATGG CATGATTCGT ATCAACTTTC CGCTGTTTCC CGAGGTCTTT CAGGCCTCGA TGTATGTCAT AGGAATATTT GGTGCCATCA ACATTATCTA CGGCGCTTTC TGTGCACTGG CACAGAAGGA TCTTAAAAAA ATGGTTGCCT ACTCTTCGAT CAGTCACATG GGTTACGTGC TGCTCGGTCT TTCTGCCGGA AACAGCGAAG GTATGGTTGG TGCGCTTTAT CAGATGTTTA ATCATGGCAC CATTACCGCC ATGCTCTTCC TTCTGGTCGG TGTTATCTAT GACCGGGCGC ATACTCGCCA GATCGAAAAA TTCGGCGGAC TCGCTTCATA CATGCCGGTC TATGCGGCCA TTGTTACGGT TGCCTGGTTT GCCTCTCTTG GTCTTCCTGG TCTGAGTGGT TTTATCTCTG AAGCGTTGGT CTTTGTTGGC GCTTTCAGTT CTGAAACAAC AAGGCCTATC GCCATTGTCT CGGTGCTCGG CATTGTTTTC GGTGCAGCTT ACCTGCTCTG GTCTCTGCAA AGGATGTTCC TTGGCAAGAG AAGGGATGAT GCGGCTTATG ATCTTGAAGT TGGTGAAGAT GGTCATGAGC ATATCCATTT TCATGACTGG AAGGGAAAGC TTGATCTTGA CGGACGTGAG CTTGCCATGC TTGTCCCGCT CGTTGTGATT ACTATTTTCC TTGGTATCTA TCCGATGCCT GTGCTCGGTA TGCTGACGAC GAGCATTAAC AAGTTGGTTC AAGTGCTTTC ACCCGTGGTG ATGTCACAGA TGTGA
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Protein sequence | MLSLIVFLPI IAGLVILAVP SSQKQIIRIV SLLAALAQGV LAVLIWRGYD PALPGITAGP GGSPLGSFQF VERVPWISLN LGGFGSLNIE YFLGIDGISV TMVILTALVS AIGILSSWTI QKQVKGYFIL YNLLASAMMG CFVALDFFLF YVFWEVMLLP MYFLIGIWGG PNREYAAIKF FLYTLFGSVF MLLVMIGLYF SVIDPLTGNH TFSLVAMASQ ENYIKDAILG PDNVVWRYVA FIVLFIGFAI KVPMFPFHTW LPDAHVEAPT PISVILAGVL LKLGTYGMIR INFPLFPEVF QASMYVIGIF GAINIIYGAF CALAQKDLKK MVAYSSISHM GYVLLGLSAG NSEGMVGALY QMFNHGTITA MLFLLVGVIY DRAHTRQIEK FGGLASYMPV YAAIVTVAWF ASLGLPGLSG FISEALVFVG AFSSETTRPI AIVSVLGIVF GAAYLLWSLQ RMFLGKRRDD AAYDLEVGED GHEHIHFHDW KGKLDLDGRE LAMLVPLVVI TIFLGIYPMP VLGMLTTSIN KLVQVLSPVV MSQM
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