Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1849 |
Symbol | |
ID | 6463377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1943643 |
End bp | 1944911 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642728060 |
Product | SMC domain protein |
Protein accession | YP_002018694 |
Protein GI | 194336900 |
COG category | [R] General function prediction only |
COG ID | [COG3950] Predicted ATP-binding protein involved in virulence |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCC GGACAGTCAC ACTGAAGAAT TTTCGGGGTA TTGAGGAGTT GTGCCTCCCG TTTGATGCGG GGCTGACGGT TATCGCTGCG GTTAACGGGG GAGGGAAAAC GACGGTTGTT GATGCATTGG CCATGTTACT ATCCTGGTTG ACAGCTCGAA CGAAACGTGA TTCAGGCAAG GGACGTTATA TCAAAGACGT TGAGATTAAA AATGGAGCGA AATTTTCTCT TCTTTCCGTT CAAACATCTT CTGGCGAGTG GTTGATAGCA AAAAACCGCA TAGGAACACA CGCTCTCAGC ATGAGTAACT TTACCGTTCT TCAGGATATC GTTCGTCACT TTCGACATCA GTTGGAGAGA GATCATTCCC TGCCTGTTTT TACCTGTTAT CCTGTTGATC GGGCAGTGAA GGATACTGAT TTGCCTCAAC GAATAAGAAC AAGGCACGAA TTTGATCCCA TCTCAGTCTA CGATAACCTT TTGAGCAGCG GTGCGAATTT TCGCCTCTTT TTTGAGTGGT TCCGTGAACG GGAAGATATT GAAAATGAGA ACCTTCGAGC CAAAGGCATA CTCAATAACG TCGACCCAAT GGAGTTTCTT GATCCGCAGT TGCAAGCCGT GCGGAGTGCG CTTGAGAAGT TTCTGCCTGA ATACCATGAC TTTAGGATAA AGCGTCAGCC CCTTCGCATG GTTGTAACGA AAGGAGATCA GGAGTTGAGA ATTGATTCGC TTTCGGTTGG TGAAACCTGC TTTATTGCGC TGATCGGCGA TATTGCCCGT CGTCTGGCAA TTGCAAATCC CCGGAAGCAG AATCCACTTG ATGGCGAAGG GGTTATCCTG ATTGATGAAA TAGATCTTCA TCTCCATCCG GCTTGGCAGA GAAGAGCGGT TACCAATCTC ACAAAGGTCT TTCCGAATGT GCAGTTTGTT GTCACAACTC ATTCGCCACA GATACTCAGT GAAGTTGCAC CCGAATCTAT TCGATTGCTT TACCAGGAGG ATAACCACAT AAAGTTTACC ATTCCCAGGC AGTCCATCGG TTTGAACTCG GCAGAAATTC TCCGGGAGTT GATGGATGAT CCGGGAATCA ACAGCGCCGT CCCGAAGCGT ATTGAAGAGA TTGCTGCAAA AATCGACCAT GATCAGTTTG ATGTTGCAAG GGAGCTTATC CAAAAACTGA AAGTCGATTT GAAGGGATCG ATTCCAGATA TTGTGGAAGC TGAAGCGACT ATTGCTATGC TGGAGCCCGA GAGGGAAGTT GGCGAATGA
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Protein sequence | MKIRTVTLKN FRGIEELCLP FDAGLTVIAA VNGGGKTTVV DALAMLLSWL TARTKRDSGK GRYIKDVEIK NGAKFSLLSV QTSSGEWLIA KNRIGTHALS MSNFTVLQDI VRHFRHQLER DHSLPVFTCY PVDRAVKDTD LPQRIRTRHE FDPISVYDNL LSSGANFRLF FEWFREREDI ENENLRAKGI LNNVDPMEFL DPQLQAVRSA LEKFLPEYHD FRIKRQPLRM VVTKGDQELR IDSLSVGETC FIALIGDIAR RLAIANPRKQ NPLDGEGVIL IDEIDLHLHP AWQRRAVTNL TKVFPNVQFV VTTHSPQILS EVAPESIRLL YQEDNHIKFT IPRQSIGLNS AEILRELMDD PGINSAVPKR IEEIAAKIDH DQFDVARELI QKLKVDLKGS IPDIVEAEAT IAMLEPEREV GE
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