| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1823 |
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| Symbol | |
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| ID | 6463429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1923919 |
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| End bp | 1925817 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728037 |
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| Product | ABC transporter related |
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| Protein accession | YP_002018671 |
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| Protein GI | 194336877 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00644209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTTT TAACAGTTGA AGGGTTACAG AAAAAATATG GTCTGAAACA TTTGTTTGAG
GATGTCTCGT TTGGCATTGA TGATCGCGAC AAGATCGGTA TTATCGGGGC AAACGGGAGC
GGTAAAAGTA CGCTTTTGAA GATTCTTGCG GGGGTTGAAA CGCCTGATAA AGGAAAGGTG
ATGGTGGCTA ACCAGAAGAG GATTGCCTAT TTGCCGCAGG ATTCTCCTTT CAATCCTGAG
GATACGGTGC TGGAAGCCAT TCTGAAGTCG AGCGATAAGG CGATGGATCT GATTTATGAG
TATGAAGTGG TCTGCAAGGA GCTGGAGACG CGCCACAGTG AAGACCCATC GTTGATTGAG
AAGATGAGTC GGCTTGCTCA CGAGCTTGAT GTGTGTGGTG CATGGGAGCT TGAATCGAAT
GCCAAAATGG TGCTTGGTAA ACTGGGTCTT TATGATCTTG CGGCAACCAT GGGTACGCTG
TCCGGTGGTC AGCGCAAGCG TGTGGCATTG GCTCATGCGC TTGTTGTGCC GAGTGACGGG
CTTATCCTTG ATGAACCGAC CAACCATCTT GATGCCGATA GTGTTGAGTG GCTGGAGCAG
TATATCCGTC GTTATCAGGG CGCGGTGCTT TTGATTACGC ATGACCGATA TTTTCTTGAT
CGTGTGGCGA CTCGAATGAT TGAAATGGAT GGCCGGACGG CGGTTACCTA CACCGGAGGA
TATTCAAGTT ACCTGTTGCA GAAGGCTGAA CAGGAAGAGC AGGCGATACG GGATGATCGC
AAGCGTTCCG CCCTTGTCCG TCAGGAGCTG GAGTGGATGA GGGGTGGCTG CAAGGCACGG
ACGACGAAAC AGAAAGCCCG TATGTTGCGT GCCGAGAGCC TTGTGTATGC TCCGAAAAAG
CAGAAGTCAA AAGAGCTTGA GATCGGCTTC GGAGCTGGTC GGCTGGGTGA TAAAATCATT
GAGTTTCACC AGGTATCAAA ATCGTACGGT GACAAGTTGC TGCTGCATTC GTTTGAGTAT
CATCTGCAAA AGGGAGACCG TATTGGCATT ATCGGACCGA ACGGTTCGGG AAAAACGACC
CTGTTTGATA TGATTACCGG GCGTGTTGAG CCTGACAGTG GCCATATTGA TCTTGGTAAG
ACGGTGAATA TCGGTTATTA CGATCAGCAG AGCAGGGGAC TTGATGATTC GAAACGGGTG
ATTGAGTATA TTCAGGAGCA TGCCGAGCAG ATCAAGACTA AGGATGGCAC AGTTTTTTCT
GCTGCGAGAA TGCTTGAGCG TTTTCTCTTT GCGCCCTCAA CCCAGTACAG TTATATCAGC
ACCCTTTCGG GAGGCGAACG CCGGCGGCTC TATCTGCTCA AACAGCTCAT TGATTCGCCC
AATGTGCTTC TGCTTGACGA ACCGACCAAC GATCTTGATA TCCCGACGCT CCGGGTGCTT
GAAGACTATC TCGATACCTT TCAGGGCTGC CTTTTGGTGG TCAGTCACGA TCGCTATTTC
CTTGACCGGA CGGTGGAGTA TATTTTCGCC TTCGAGGAGA ACGGCAGTAT TCGTCGCTAT
CCGGGTAACT ATACCGTCTA CCTCGAAATG AAAGCAGCTT TGGCGGCCAA GGGAAAGGAT
GAAAAGAAAT CATCTGCGAA AGAGGCTCAG AAGATTCTTC CACCGGTATC GGTAAAGCCA
AAGCCCTCAA AGCTTTCAGG CAAGGAGAAG CGTGAGCTTG AGCTGCTTGA GCAGACGATC
CACGATGCTG AAATCCGTCA GTCGGAGATA GCCGCACGTC TTGCGTCGGC AGGTAGTGAT
TTTGGGTTGC AGCAGCAGCT TGGGTCGGAA CTTCAGGCGC TTCAACAGCA GCTTGAAAAA
GAGATGGCCC GGTGGAGTAA GCTGGCTGAA CAGGCGTAG
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| Protein sequence | MVLLTVEGLQ KKYGLKHLFE DVSFGIDDRD KIGIIGANGS GKSTLLKILA GVETPDKGKV
MVANQKRIAY LPQDSPFNPE DTVLEAILKS SDKAMDLIYE YEVVCKELET RHSEDPSLIE
KMSRLAHELD VCGAWELESN AKMVLGKLGL YDLAATMGTL SGGQRKRVAL AHALVVPSDG
LILDEPTNHL DADSVEWLEQ YIRRYQGAVL LITHDRYFLD RVATRMIEMD GRTAVTYTGG
YSSYLLQKAE QEEQAIRDDR KRSALVRQEL EWMRGGCKAR TTKQKARMLR AESLVYAPKK
QKSKELEIGF GAGRLGDKII EFHQVSKSYG DKLLLHSFEY HLQKGDRIGI IGPNGSGKTT
LFDMITGRVE PDSGHIDLGK TVNIGYYDQQ SRGLDDSKRV IEYIQEHAEQ IKTKDGTVFS
AARMLERFLF APSTQYSYIS TLSGGERRRL YLLKQLIDSP NVLLLDEPTN DLDIPTLRVL
EDYLDTFQGC LLVVSHDRYF LDRTVEYIFA FEENGSIRRY PGNYTVYLEM KAALAAKGKD
EKKSSAKEAQ KILPPVSVKP KPSKLSGKEK RELELLEQTI HDAEIRQSEI AARLASAGSD
FGLQQQLGSE LQALQQQLEK EMARWSKLAE QA
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