Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1808 |
Symbol | |
ID | 6463452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1912680 |
End bp | 1913453 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642728023 |
Product | Gas vesicle synthesis GvpLGvpF |
Protein accession | YP_002018657 |
Protein GI | 194336863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.580439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGG ATGGCAAGTA CGTTTATTGT ATCATTGCTT CTACTTATGA ATGCAATTTT GGTGCAATTG GAATAGGGGG TAGAGGTGAT CTTGTAAATA CAATTGGATT TCAGGGCTTA AGTATGGTTG TTAGTGACCA CCCACTTAAT CATTTTGTTT TAAACCCGGA TAATATTCTT GCTCATCAAA GAGTCATAGA GGTCGTGATG AGTCAATTCA ATAGTGTTAT TCCAGTTCGA TTTGGCACAG TTGCAGCAAC ACCAGATGAA ATAAGAAATC TTCTTGATCG CAGGTATGGC GAATTATCTG AACTTCTTGA GCGTTTTGAA AACAAGGTTG AGTATAATCT TAAAGCATCA TGGCGCTGCA TGATCGATAT ATATAAAGAG ATAGATAAAG AACATGTTGA GTTAAAACAA TTGAGACGTG AAATAGAGGG ACTGAAGGAT GAAGAAAAAA GAAAACTGCT TATTGTTGAG GCCGGACATA TTATTGAGAA TGAGTTGCAA AAAAAGAAAG AAGTCGAAGC ATACGAAATT GTAACATATT TGAGAAAGAC AGTTGTTGCT CATAAGCATA ATAAGACAAC TGGCGAGGCT ATGTTTATGA ATACCGCTTT TTTATTGAAC AAAGGCCGTG AAGTAGAGTT TGATAATATA ATGAATGATC TTGGTGAGCA ATATAAAGAC AGAAGTGACT ATTATTATAC AGGCCCTTTA CCGATCTTTA ACTTTATAGA TTTACGAATT CTTCCTGAGA AATGGGAACT CTGA
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Protein sequence | MEKDGKYVYC IIASTYECNF GAIGIGGRGD LVNTIGFQGL SMVVSDHPLN HFVLNPDNIL AHQRVIEVVM SQFNSVIPVR FGTVAATPDE IRNLLDRRYG ELSELLERFE NKVEYNLKAS WRCMIDIYKE IDKEHVELKQ LRREIEGLKD EEKRKLLIVE AGHIIENELQ KKKEVEAYEI VTYLRKTVVA HKHNKTTGEA MFMNTAFLLN KGREVEFDNI MNDLGEQYKD RSDYYYTGPL PIFNFIDLRI LPEKWEL
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