Gene Ppha_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1755 
Symbol 
ID6462906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp1854413 
End bp1855573 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content48% 
IMG OID642727967 
ProductCytochrome-c peroxidase 
Protein accessionYP_002018604 
Protein GI194336810 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000138624 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT ATCCATTTGT TGCAAGCTTG CTGGTGATTT GCCCTCTTAC CTTTTTGCAT 
GAAGAGCTGC GGGGTGAGCC AGGGAAGTAT GTTCTGCCTG TTGTAGAGCC ATTGGCACAT 
AAGGCGTTCA AACCAAGAAT GGGTGAACCG GTCAAGCCGT TGAAGGTGCC TGAAGTGCTG 
AACCCGGAGA TGGTGGAGCT TGGTAAAAAA CTCTTCTTTG ATCCTCGCCT ATCCAGAACA 
GGATTCATTT CCTGCAACTC CTGTCACAAT CTCAGTATGG GCGGCAGTGA CAATCTGAAA 
ACCTCTGTTG GACATAACTT GCGTGAGGGT GCGCTTAACG CTCCTACAGT CCTTAATTCG 
AGCATGAGTT TTGCTCAGTT TTGGAATGGG CGGGCAAAAG ATCTCAAGCA GGTGTTATCG 
ATTGGGGATT ATGCCTATGG AGGTAAGGTT GCTTTCGTTG AAGGGCCGAT TGACGGGAAG 
GGGAGTAAAC CAGGGAAACG GCCTGCTGCT GTAGTGGGCA ATCCCGGAGG TGTCTCATTT 
ACTCACGATC TTGCTGTTCC GATCCTGCAA TCTATTCCTC TCTATGCTGA AGAGTTCAGC 
AAGGTATTTC ATGCAGGGAA GATTACTCTT GATCAGGTTA TAACGGCTAT ATCCGCATTT 
GAAGAGACGC TTCTTACACC GAATTCCCGT TTCGATCAAT GGCTGCGCGG TGATGACAGG 
GCAATAACCA AGCAGGAACT TGCTGGTTAC AGGCTGTTCA AGAGCAGCGG GTGTACTATT 
TGTCATAATG GCGCCTCTTT TGGCGCGAAT TCATTCCAGA AAACAGGCGC TGTGAAGCCA 
TACAAAACAA CCTGTTCCGT TTCAGGTTGT TTTGAGATAA GCAAAAAAGA TGTAGATCGT 
TTCAGATTCA AGGTACCAAC CTTGAGGAAT GTTGAACTGA CTTATCCCTA TTTCCATGAC 
GGTGAGGTGG CAACGCTCTC CAAAGCTGTT GAGATTATGG GTCAGATTCA GTTGGGCAAA 
ACGTATACAG AGCAGGAAAC TGCCAGCATC GTTGCCTTTC TGAAGAGTTT GACTGGCGAT 
CAACCGCAAT TCATGCTTCC GCAGTTGCCG CCATCATCCG AAACCACACC TCCTCCGCAG 
CCAATAATGC CCTCTTCTTA A
 
Protein sequence
MKIYPFVASL LVICPLTFLH EELRGEPGKY VLPVVEPLAH KAFKPRMGEP VKPLKVPEVL 
NPEMVELGKK LFFDPRLSRT GFISCNSCHN LSMGGSDNLK TSVGHNLREG ALNAPTVLNS 
SMSFAQFWNG RAKDLKQVLS IGDYAYGGKV AFVEGPIDGK GSKPGKRPAA VVGNPGGVSF 
THDLAVPILQ SIPLYAEEFS KVFHAGKITL DQVITAISAF EETLLTPNSR FDQWLRGDDR 
AITKQELAGY RLFKSSGCTI CHNGASFGAN SFQKTGAVKP YKTTCSVSGC FEISKKDVDR 
FRFKVPTLRN VELTYPYFHD GEVATLSKAV EIMGQIQLGK TYTEQETASI VAFLKSLTGD 
QPQFMLPQLP PSSETTPPPQ PIMPSS