Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1751 |
Symbol | |
ID | 6462915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1850906 |
End bp | 1851724 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642727964 |
Product | transglutaminase domain protein |
Protein accession | YP_002018601 |
Protein GI | 194336807 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.118558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCTGA AAGTTGAACA CTCAACCCTG TTTGAATATG ATAATCCAAT CTATGAAACG GCGACCGAAG TAAGGCTCCA CCCTGATAAT AATCCGGCAG CTCCCCAGCG CTGCACCAGC TTTGACCTTC TGGTGGATCC CCCTGCCACT ATTTTTGAGT ACACCGATTT TTACGGCAAC CAGGTCAACC ACTTCAACCT GCTCCAGAGC CACAAACGGG TAGAGATCAT CGCAACTTCT GTAGTGGAAA CCGGCATGGG CCACGCTGAT GCTGGCGATA ATGAGGATTT TTTTCTGATG GATTTCTCTT GCCAGAGCCG CTATGTCCAT TTCGACCAGG CGATAAGAGA TTTTTCAACT CTTTTTGCCA CCAATACCGA CAGTTTTCAG CTTGCCGAAT CGATCTGCCG CCATATCAAC GATTCATTCA TCTATGAACC CGGAGTGACG GATGTCCACA GTACCAGCGC CGTCGTTATG GCCCTCGGGC GGGGAGTTTG CCAGGATTTT GCCCATATCA TGCTTGCCGC CTGCCGTTAT CTTGGTGTCC CGGCCCGCTA CGTCAGCGGG TACCTCTTTG GAGGAAGCAC CCCCGATGGG CGGGATGAAG CAAGCCATGC ATGGTGTGAA GTATTCTGCG GCAAGGAAAA AGGGTGGATC GGCATGGACC CGACGCATAG CACCCTTTTT GTTGATGAAC GCTATATCAA AATTGGTTCA GGCAGAGACT ATGACGACGT TCCTCCAGTA CGGGGTACCT ATAAAGGCAA TGCAGAGGAA AAGCTGACGG TCGCCGTAAG GGTAAGCTCC ATGGAGTAA
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Protein sequence | MILKVEHSTL FEYDNPIYET ATEVRLHPDN NPAAPQRCTS FDLLVDPPAT IFEYTDFYGN QVNHFNLLQS HKRVEIIATS VVETGMGHAD AGDNEDFFLM DFSCQSRYVH FDQAIRDFST LFATNTDSFQ LAESICRHIN DSFIYEPGVT DVHSTSAVVM ALGRGVCQDF AHIMLAACRY LGVPARYVSG YLFGGSTPDG RDEASHAWCE VFCGKEKGWI GMDPTHSTLF VDERYIKIGS GRDYDDVPPV RGTYKGNAEE KLTVAVRVSS ME
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