| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1643 |
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| Symbol | |
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| ID | 6463182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1732532 |
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| End bp | 1733131 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727859 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_002018497 |
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| Protein GI | 194336703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.480856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACAA TTGTATTAGG TGTAGAACCT CGCGTTATCA AAAAGAAAAA TGCAGAAAAG
CTGCGCAAGA ACGGCATAGT CCCCGGTGTT ATCTATCATA AAGGCGAAGA GACCATTGCT
ATAAGCGTCA ATGAACTGGC ACTCAGAAAA TTGGTTCATT CAGCCGAATC ACATATTATT
GATCTTCAGT TCCCTGACGG AAAAATCAAA CGTTCTTTTA TCAAGGATGT TCAGTTTCAC
CCGGTTACTG ACAGAATCAT TCACACCGAC TTCCAGCTCT TCTCTGCTGA GGAGATCATT
GAACTCGAAG TACCGGTTGC TGTTTCCGGT GAAAGTGCCG GCGTTGAAAA AGGCGGAAAA
CTGCTGATTA TCCTCCATGC GCTCACCATC AAAGGCAAAC CGGAAGATAT GCCCGACCAC
CTTGTTGTCG ATGTTACGGC ACTTGAAATC GGTCATTCAA TCCATGTCAA AGAGATCCCC
CTGGACGCCT ATACCGGCCT GCAGATCATG GATGATCCCG ACACTCCGGT CATTACCGTT
CTTGCATCGA AAAAAGAGGC TGAAGCCACT CCCGAAGCGG CTGTCGCAAC AGCAAGCTGA
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| Protein sequence | METIVLGVEP RVIKKKNAEK LRKNGIVPGV IYHKGEETIA ISVNELALRK LVHSAESHII
DLQFPDGKIK RSFIKDVQFH PVTDRIIHTD FQLFSAEEII ELEVPVAVSG ESAGVEKGGK
LLIILHALTI KGKPEDMPDH LVVDVTALEI GHSIHVKEIP LDAYTGLQIM DDPDTPVITV
LASKKEAEAT PEAAVATAS
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