Gene Ppha_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1642 
Symbol 
ID6463186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1731529 
End bp1732500 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content47% 
IMG OID642727858 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_002018496 
Protein GI194336702 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC CCATTAAAAT TTTCGCGGGA CGCAGCAATC CGGCTCTCGC AGAAAAAATT 
GCTAAGTACC TCGACATGCC CCTTGGCAAC GCAAAAGTCG AAAACTTTTC TGACGGGGAA 
ATTTCGGTAA ACTATTTTGA ATCGATCCGT GGATCGGATA TGTTCATTAT TCAGTCCACC 
AATCCGCCAG GCGACAACCT GATGGAGTTG CTGATCATGA TTGATGCTGC CAGAAGATCT 
TCAGCAGCAA GAATCACCGC AGTAATTCCC TATTACGGCT ACGCCCGTCA GGACAGAAAA 
GATCGTCCCC GTGTCGCCAT CACAGCAAAG CTCGTAGCAA ACCTGCTCAC CAAAGCAGGA 
GCACACAGAA TTCTTACCAT GGATCTGCAT GCCCCGCAGA TTCAGGGCTT TTTTGATATC 
CCGTTTGATC ACCTCTACTC CAGTGTAATT CTGATCGATC ATATCCGCGA AAGAGAATTT 
CGTGACAACC TCGTCGTCGC CTCCCCTGAT GTCGGAGGTG TCAAACTTGC CCGCAAATTT 
GCTGAAGAGC TCGGTACCGA CCTCGTGATT GTCGACAAAC GCCGCCCTGC AGCCAACGTT 
GCTGAAGTAA TGAACATTAT CGGTGATGTT AACGGCAAAA ACGTCCTCCT TGTTGACGAC 
ATGATCGACA CTGCAGGCAC CATTGTCAAT GCAGCAAAAG CAATCCGTGA AGCTGGTGGC 
CTTAAAATCT ATGCCGCAGC AACACACCCG ATTCTTTCCG GACCAGCAAT CAAAAGAATC 
GACGCATCAA TACTTGAAAA GGTGATCGTA ACCGATTCGG TCGTCACCAA TCACGAATAT 
TCAGCGAAAA TTGAGACTGT AACCGTCAGC AATCTCATCG GTGAAGCTAT CAAGCGTATT 
TACGAAGATG ATTCTGTAAG CTGCCTGTTC GACAGCAAGA ATATCATCGA AAAACTTACG 
AACCTTCATT AA
 
Protein sequence
MAKPIKIFAG RSNPALAEKI AKYLDMPLGN AKVENFSDGE ISVNYFESIR GSDMFIIQST 
NPPGDNLMEL LIMIDAARRS SAARITAVIP YYGYARQDRK DRPRVAITAK LVANLLTKAG 
AHRILTMDLH APQIQGFFDI PFDHLYSSVI LIDHIREREF RDNLVVASPD VGGVKLARKF 
AEELGTDLVI VDKRRPAANV AEVMNIIGDV NGKNVLLVDD MIDTAGTIVN AAKAIREAGG 
LKIYAAATHP ILSGPAIKRI DASILEKVIV TDSVVTNHEY SAKIETVTVS NLIGEAIKRI 
YEDDSVSCLF DSKNIIEKLT NLH