Gene Ppha_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1635 
Symbol 
ID6463201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1722901 
End bp1723590 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content52% 
IMG OID642727851 
ProductABC transporter related 
Protein accessionYP_002018489 
Protein GI194336695 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACTC AAGCTGTCAT CACCATGAAA TCGCTCTGCA AATTCTATGA GATGGGCGAT 
CAGGTTGTCC ACGCACTTGA CTCGATCAAC CTTGACTTCA AACTGAACGA CTACGCAGCA 
ATCATGGGGC CATCGGGAAG CGGGAAATCA ACTCTGATGA ATATTATCGG ATGTCTTGAT 
ACACCAACCT CCGGCACTTA TGAGCTCAAC CATCAGAGTG TTGCGGAGAT GGATGACGAC 
GAACTGGCGC GTATCAGAAA CCGTGAAATC GGCTTTGTTT TCCAGACCTT TAACCTTCTG 
CCCCGCCTGA ACTGCCTGCG CAATGTCGAA CTTCCGCTGA TCTATGCCGG AGTACCGCCT 
GAAGAACGGC AGGAGCGAGC ACGTGAAGCG CTTATCAAAG TGGGGCTCGG CGACCGGATA 
ACACACAAGC CCGCAGAACT ATCCGGTGGC CAGATTCAGC GAGTAGCCAT AGCGAGAGCG 
CTGATTAACA AGCCCTCCAT CATTCTTGCT GATGAACCGA CCGGTAACCT CGATACCGCA 
ACAAGCCACG ACATCATGGA TATCTTCGGT TCGCTTTCCG AAGCAGGCAA CACCATTATC 
CTGATCACCC ATGAAGAGGA TATCGCCCGC TATACCCGCC GAGTCATTCG TCTCCGGGAT 
GGAAAAATAG AAAGCGACAC CAGACCATGA
 
Protein sequence
METQAVITMK SLCKFYEMGD QVVHALDSIN LDFKLNDYAA IMGPSGSGKS TLMNIIGCLD 
TPTSGTYELN HQSVAEMDDD ELARIRNREI GFVFQTFNLL PRLNCLRNVE LPLIYAGVPP 
EERQERAREA LIKVGLGDRI THKPAELSGG QIQRVAIARA LINKPSIILA DEPTGNLDTA 
TSHDIMDIFG SLSEAGNTII LITHEEDIAR YTRRVIRLRD GKIESDTRP