| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1634 |
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| Symbol | |
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| ID | 6463202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1721640 |
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| End bp | 1722893 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727850 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002018488 |
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| Protein GI | 194336694 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC AAAAATCCTT GCTGAATCGA AAAACAATAT GGATCTCCCT CGCAGCAGTT
CTGCTCGCAG GAGGATTGCT CTTTTCCTTT TTCAAGCTTC GCGAAAAACC AGTTGAGGTT
ACCACCGAAA AGGTCTCCAT CAAAGAGGTT GTCCATATCG TCACGGCTAC CGGAAAAATT
GAACCCGCGC TTGTAGTCGC CATGTCGCCT GACGTTTCAG GGGAGATTAT CGAGTTGCCC
ATCAGGGATG GACAGAGTGT AGAGAAAGGA GAGCTTCTCT TTAAAATTCA GCCAGACCTC
TATGTAAACC AGGTCGAACA GAGTCTCGCC CAGCTTAATT CCGCAAAATC ACAAAGTATG
GAGACGCGGG CCAGAAAGCT CAAGGCAGAG GATGATTTCC ATAAGGCATC ACTGCTCTAC
AAAGAAAAGC TGATCTCCGA ATCAGACTAT ATCACATCGA GAACCAATGC ACAGGCAGCA
CAAGCCGCCT ACCAGGCATC AATCTACACA ATAGCACAAA ACAAAAGCCT GCTTGACCAA
AATCAGGACA GGATGAACAA AACCGTAGTA CGGGCTCCAA TCAACGGCAC CATCATAGCC
CTGAACAGCA AGCCGGGGGA ACGCGTTGTC GGTACTGGTC AGTTTCCCGG AACCGAGGTA
CTGCGACTGG CAAACCTCGA CAGTATGCAG GTAGAGGTAG AGGTAAATGA AAACGACATT
GTCAATGTAA AAACAGGTAA TCCAGTCTCC ATCACTGTTG ATGCATACGG CGATCGCATC
TTCAGGGGAG TTGTGCATGA AATTTCCAAT TCAGCAATCT CCCAGGCCGC TGGAACCCAG
GATGAGGTCA CCAATTTTTC GGTAAAGATC CGCATCTTCA ACCATGACAG GATGCTAAAA
CCCGGTATGA GCGCAACGGC AGATATTGAG TCCGTGCGGA TAAAAAATGC TCTGGTCGTG
CCGATTCAAA GTGTAACCAT CAGAGATGTA TCTGGTAATA CTGCGAACAA AAAAGCTCAA
AAATCAGACA TCAAGATAAC CACCACCAGC AAAGAACCCG AAAGTCGGCA AGGTGTTTTT
GTCGTTAAAT CAGGTCGAGT ATCGTTCCGA CGAGTGAAAA CAGGGACGAC CGACAATACC
CATATTATCG TCACCGCTGG ACTCAGCAAA GGAGAAGAGG TTGTTTCAGG AAGTTATACC
GCCATTACCA GTCAGCTCAA AGAGGGAAGC AAGGTTAAAC AGCAGCAAAA ATAA
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| Protein sequence | MSKQKSLLNR KTIWISLAAV LLAGGLLFSF FKLREKPVEV TTEKVSIKEV VHIVTATGKI
EPALVVAMSP DVSGEIIELP IRDGQSVEKG ELLFKIQPDL YVNQVEQSLA QLNSAKSQSM
ETRARKLKAE DDFHKASLLY KEKLISESDY ITSRTNAQAA QAAYQASIYT IAQNKSLLDQ
NQDRMNKTVV RAPINGTIIA LNSKPGERVV GTGQFPGTEV LRLANLDSMQ VEVEVNENDI
VNVKTGNPVS ITVDAYGDRI FRGVVHEISN SAISQAAGTQ DEVTNFSVKI RIFNHDRMLK
PGMSATADIE SVRIKNALVV PIQSVTIRDV SGNTANKKAQ KSDIKITTTS KEPESRQGVF
VVKSGRVSFR RVKTGTTDNT HIIVTAGLSK GEEVVSGSYT AITSQLKEGS KVKQQQK
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