Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1624 |
Symbol | |
ID | 6463223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1712494 |
End bp | 1713759 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727840 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002018478 |
Protein GI | 194336684 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.767884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGCGAG AGAGGCAGAA ATATAAAGTG TTTTCCTGGC TGCTCTTTGA CTTTGCCAAC ACTTCCTTCA GCGTGATGAT GGTCACCTTT GTCTTTCCGC TGTACTTCAA AAATGTTATC TGCAAAGGGG AACCTTCAGG AGATGCCCTG TGGGGTTTCA GCGTCAGTCT CTCGATGCTG CTGGTTGCCC TGATCTCTCC GGTTCTCGGG GCTGCAGCCG ATTATTCCGG AAAACGGAAG CGTTTTCTTC TTTTTTTTAC CCTTACCTCG ATTGTTGCCA CAGCTCTGCT CTCCTTTTCG GGCCCTGGAA TGGCTTTGGT AGCTGTTCTG CTCTTCGTTC TTGCCAATAT GGGTTTTGAG GGTGGGCTTG TTTTTTATGA TTCCTATCTC AAGCAGCTTG CTTCTGCCAA GAGCATCGGA AGGGTTTCAG GGTACGGCTT TGCCATGGGA TATCTTGGCG CCCTCTCCAT TCTGCTGCTG GTTCAGCCGC TGCTCAGCAA GGGTATTGTT TTGTCCAATA TGCCGAATGT ACAGTTGAGC TTTTTGGTCG TTGCGATTTT TTTTGCTCTT TTTGCCGCTC CGCTTTTTCT GGTGCTGCGG GATGAAAAAA AAGGGGATAG GCCTGCAATT TCTTTTACTG CTATCCGTTG TTCTCTCAGG GAGGTGAAGT ACACCGTTCA GCATATTATG AGCTATCCCG ACCTTGCCCG TTTTCTCCTG GCCTACTTTT TCTACAATGA TGCTATTTTG ACCGTTATCG CCTTTTCGTC GATTTATGCC CAGAACACTC TTGGCTTTAC GACTGGAGAG CTGATTCGGT TTTTTATGTT GGTGCAAACG ACGGCCATTG CCGGTTCTCT TATTTTTGGT TTTGTGACTG ATAAAATCGG GCCGAAACGT ACCATTGTCA TTACCCTCCT GATTTGGTTT GTTGTGGTTG TTGCGGCTAT CTTTGCAGAC AGCAAGGAGC TCTTTTTTTA TACAGGAATG CTTGCTGGTA TGTCAATGGG GTCATCCCAG GCGGCCTCCC GATCCATGAT GACCAGGCTG ACACCCCAGG AACATGTGAC CGAGTTTTTC GGTTTTTATG ATGGTACTTT TGGTAAGGCT TCGGCCATAG CGGGGCCTCT TGTTTTTGGA TTGGTATCAG CTCAGGCTGG GAGCCAGAAA GCTGCACTTG CCTCTCTGCT GCTTTTTTTT ATTCTTGGTT TGCTGCTGAT GACGAGGGTC AGATCGGTTG GGAGCGGATC AACCCGTGTA ACGTGA
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Protein sequence | MLRERQKYKV FSWLLFDFAN TSFSVMMVTF VFPLYFKNVI CKGEPSGDAL WGFSVSLSML LVALISPVLG AAADYSGKRK RFLLFFTLTS IVATALLSFS GPGMALVAVL LFVLANMGFE GGLVFYDSYL KQLASAKSIG RVSGYGFAMG YLGALSILLL VQPLLSKGIV LSNMPNVQLS FLVVAIFFAL FAAPLFLVLR DEKKGDRPAI SFTAIRCSLR EVKYTVQHIM SYPDLARFLL AYFFYNDAIL TVIAFSSIYA QNTLGFTTGE LIRFFMLVQT TAIAGSLIFG FVTDKIGPKR TIVITLLIWF VVVVAAIFAD SKELFFYTGM LAGMSMGSSQ AASRSMMTRL TPQEHVTEFF GFYDGTFGKA SAIAGPLVFG LVSAQAGSQK AALASLLLFF ILGLLLMTRV RSVGSGSTRV T
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