| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1623 |
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| Symbol | |
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| ID | 6463225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1711142 |
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| End bp | 1712428 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642727839 |
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| Product | ribonuclease BN |
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| Protein accession | YP_002018477 |
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| Protein GI | 194336683 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.722239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGAGA AGGAAAGAAG AGGGCAAAAC CCCAAAACAG AGAGCAACGC TGTCGAATTG
GTCTCCTGTA TGCGTGTATT TATTCCTTTT TTCTGGAAAA ATTTTATTCA TGACAGAATT
TTTCTTGGCG CTGGTTCGCT TGCATTTCAG ACGCTTTTGT CTATTGTGCC AATCCTTGCC
GTTATCCTTT CCATTCTGAA TGTTTTTGTT GTCTTTACCC CCTTCAAGCG CTCTCTTGAA
GATTTTCTTG TCCAGAATTT TATGCCTGGA GCCGGCAATG TGCTCAATCA CTATCTGACT
GATTTTATTG GCAAGACCGC CAGCGTGCCG ATTCTTGGAG GGGTGTTCCT TTTTATCATT
GCACTCTTTC TCATCTCAAC GGTTGATCAT ACGCTCAATG AAATATGGGA AGTTCATGCG
CCTCGCAAGG CCTTGCAGGG TTTTACCCTC TACTGGACAG TTCTGACGCT TGGGCCGGTA
CTTATTGGAA GCAGTCTTGC TGCCAGCTCC TATGTCTGGT ATATGGTTTT TACCGATGGT
CCTCTGCTTG AGCTGAAAAC CCGCCTGCTC TCTTTTTTCC CCTTTATTAA TTCCGTTGCG
GCCTTTTTTC TGCTCTATAT GCTGGTACCA AACCGTCGGG TCAGGTTTGT TCATGCCTTT
TCCGGTGCGC TGCTTGCTGC GCTTCTTTTT GAACTCTCAA AGAGATGGTT TACTTTCTAC
ATCACGCATA TTGCAACGTT TGAACATATT TACGGAGCAT TGTCGGTTAT TCCGATGCTT
TTTTTCTGGG TCTATCTTGG CTGGATTGTG GTGCTGACCG GTGCGGAATT TGTTTTTTGT
CTTGGCGCGC TCAAACCAGT TGAGAGGATC GCCGATGTAT TCAGCCCCTT GCGTGGAGTG
CCCGAGATAC TGTCGGTGCT TGCTCATATC TGGAATGGCC AGAAGAGTGG CAATGCCATG
AATATGAAAA AAATGTTGAA GGTTATTGAG GGTCTCACTC CCTCCGGTTT AAGAAAGGTT
ATTGATATCC TGCTGCAGAA CGGTCTGCTC CATGTAACTG TAAATGGTGA TCTTGCAATC
AGTCGCGATC TTTATACCAT GACGCTCTAC GATCTTTATG CAATAATACC CAGCGGATTC
TGGGGTGATG AAAACGGTTT GCTGATTTCA GGAGGTAATA GCGTACATTT AAAAACAATC
AGCAAGGGTG TTACGGAGTG TCTGAAAAAC AGCATGGATT TGCCCCTTGC CCCTTTGTTA
GAGGACATTA ATCAACAGCC AGAATGA
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| Protein sequence | MGEKERRGQN PKTESNAVEL VSCMRVFIPF FWKNFIHDRI FLGAGSLAFQ TLLSIVPILA
VILSILNVFV VFTPFKRSLE DFLVQNFMPG AGNVLNHYLT DFIGKTASVP ILGGVFLFII
ALFLISTVDH TLNEIWEVHA PRKALQGFTL YWTVLTLGPV LIGSSLAASS YVWYMVFTDG
PLLELKTRLL SFFPFINSVA AFFLLYMLVP NRRVRFVHAF SGALLAALLF ELSKRWFTFY
ITHIATFEHI YGALSVIPML FFWVYLGWIV VLTGAEFVFC LGALKPVERI ADVFSPLRGV
PEILSVLAHI WNGQKSGNAM NMKKMLKVIE GLTPSGLRKV IDILLQNGLL HVTVNGDLAI
SRDLYTMTLY DLYAIIPSGF WGDENGLLIS GGNSVHLKTI SKGVTECLKN SMDLPLAPLL
EDINQQPE
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