| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1568 |
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| Symbol | |
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| ID | 6463347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1658015 |
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| End bp | 1659940 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642727789 |
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| Product | Oxaloacetate decarboxylase |
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| Protein accession | YP_002018429 |
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| Protein GI | 194336635 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00759156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCAGATTTAT GGATGTCTCA TTCCGTGACG GGTTTCAGTC CTGTTTTGGT
GCGAGAGTAA AGACCGAGGA CTTTTTGCCT GCCCTTGAAG CTGCCGTTCA TGCCGGTACA
GACAATTTTG AAATTGGCGG TGGAGCCCGC TTTCAGAGCC TCTATTTCTA TTGCGAAGAG
GATGCTTTTA CCATGATGGA TGAAGCCCGC AAGGTTGTGG GGCCGGATAT CAACCTGCAG
ACCCTTTCAC GAGGAGCCAA CGTCGTTGGC CTTGTTTCGC AGTCACGCGA TATTATTGAT
CTCCATGCCC GTCTCTTCAA AAAGCATGGT ATCACCACCA TCCGGAATTT CGACGCCCTG
ATGGATGTCC GCAATCTCTC CTACTCCGGT CAGTGCATTC ACGATGCAGG GCTTCGCCAC
CAGGTCGTTG TTGCCATGAT GGGCCTTCCA CCCGGATTGC AAGAGAGCTA TTGCCATACC
CCGCAGTTCT ATCTCGACAA GCTGCGGGAG ATACTTGATG CCGAAATTCC ATTCGACAGC
GTTGCTTTCA AGGATGCTTC AGGCACAACA ACTCCGGCTA TTGTTCATGA AACCATCAAG
GGAGCACGGA AGATGCTGCC CGAAGGCACC GAAATCCAGT TCCATACCCA CGACACGGCA
GGGATGGGCG TAGCCTGCAA CTATGCCGCC ATCACCGGTG GAGCTGACAT TATTGATCTC
TCCATGGCTC CGGTCAGTGG AGGAACCGCC GAAGTGGATA TCCTCACCAT GTGGCAGAGG
CTCAGAGGCA CCGAATACAC CCTCGACATA GACCAGGAGA AATATCTTGA GGTGGAGGCG
CTCTTTATTG ATCAGATGTA CAAGTACTAC ATGCCCCCTG AAGCCACAGC GGTCAATCCG
GTCATCTCCT TCTCACCCAT GCCCGGCGGA GCCCTCACGG CAAATACCCA GATGATGCGC
GACAATAACA CGCTGCACCT CTTCCCCGCA GTAATCAACA ACATGCGTGA GGTGGTGGTC
AAAGGAGGCT TTGGCGCATC GGTCACCCCG GTTTCACAAT TCTATTTCCA GCAGGCTTTT
GCCAACACCA TTCAGGGCCA CTGGAAAAAG ATCACCGACG GTTATGGCAA AATGGTGCTC
GGCTACTTCG GCAAGACCCC TGCCCGCCCT GACGATGAGG TTGTCAGGCT CGCATCCGAA
CAGCTCGGTC TTCCTCCAAC GGTTGAAGAT GTGCACGATA TCAACGATCG CAATCCGGAA
CTTGGCGTAG CCTATAATAA ATCGCTGCTC CATGAAGCCA ACATTCCGCA GACCGACGAA
AACATCTTTA TCGCAGCAAC CTGCGGCGCC AAAGGTATCG CTTTTCTTCA GGGAGATTGC
TCAACCGGTA TTCGCTACAA GGCCGATATT GCCGTTGAAA TCAAGGCAAC ACCAAGAGCA
GAGGTGGTTG CGGCCTACCA TGAGGCACAC AAACACGATA TTCACCAGGA AGAGGTGAAC
CATCGGCTTA AGGATCTCTT TTCCAAACTG CCACCTGCAG CGCCGGTTGC GCCTCCGGGA
GCATCAAAGG TGATCTCAAT GGCAGGCAAC TTTACCGTTT TTGTTGATGG AGCCCCCTTC
ACCGTCTCCT TTGCCGAAGG CTCCGCCATC AATCCCCAAA CGGTTGCCCT GCCATCAGCG
GAAGGCTCTC CTGAAGCCCA CCACCCGCAT CCAGGGACAC CAGTGCCGGC GGTTATGCCC
GGCAACGTCT TCTCGATTGC CGTCAAGCTT GGTGATGAGG TCAGGGAGGG AGAAGAGGTC
GCCATCATCG AAGCCATGAA AATGGAAAAC TCCGTCAAAG CCCCCTGTGG CGGAAGAATC
CTCTCCATCA CGGTAGCCAA AGGCGACTCC GTCGGAATGG GAGAGACCAT GATGACCATC
GGATAG
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| Protein sequence | MKKIRFMDVS FRDGFQSCFG ARVKTEDFLP ALEAAVHAGT DNFEIGGGAR FQSLYFYCEE
DAFTMMDEAR KVVGPDINLQ TLSRGANVVG LVSQSRDIID LHARLFKKHG ITTIRNFDAL
MDVRNLSYSG QCIHDAGLRH QVVVAMMGLP PGLQESYCHT PQFYLDKLRE ILDAEIPFDS
VAFKDASGTT TPAIVHETIK GARKMLPEGT EIQFHTHDTA GMGVACNYAA ITGGADIIDL
SMAPVSGGTA EVDILTMWQR LRGTEYTLDI DQEKYLEVEA LFIDQMYKYY MPPEATAVNP
VISFSPMPGG ALTANTQMMR DNNTLHLFPA VINNMREVVV KGGFGASVTP VSQFYFQQAF
ANTIQGHWKK ITDGYGKMVL GYFGKTPARP DDEVVRLASE QLGLPPTVED VHDINDRNPE
LGVAYNKSLL HEANIPQTDE NIFIAATCGA KGIAFLQGDC STGIRYKADI AVEIKATPRA
EVVAAYHEAH KHDIHQEEVN HRLKDLFSKL PPAAPVAPPG ASKVISMAGN FTVFVDGAPF
TVSFAEGSAI NPQTVALPSA EGSPEAHHPH PGTPVPAVMP GNVFSIAVKL GDEVREGEEV
AIIEAMKMEN SVKAPCGGRI LSITVAKGDS VGMGETMMTI G
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