Gene Ppha_1500 details

Gene Information

• Locus tag: Ppha_1500
• ID: 6463490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1580051
• End bp: 1580674
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642727727
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_002018367
• Protein GI: 194336573
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCCT CTCCACCATT TCTCTGTGTT ATAACCGATG AGGCGTTATG CCCCGTAACT 
CTTGCAGAAC AAGCCCTCAA AGGGGGGGCT GCCATGATAC AGTTGAGACA TAAAACGGCA 
TCAGGCAGCC AACTTTTCTC ATGGGCTGTT GAAATAAGCA AACGCTGCCA TCAATACCAT 
GCACTCTGCA TTATCAATGA CCGTGTGGAC ATTGCCCTTG CAAGCAGCGC TGACGGTGTT 
CACCTCGGAC AGCAGGACAT GCCAGCCAGT ACAGCCCGTA AACTGCTTGG AAAAATGGCC 
ATTATCGGGG TTTCTGCATC TTCACCGGAC GAGGCACGCC TGGCTGAACA AGAGGGGGCG 
GACTATATCG GATTTGGTCA CATCTATCCA ACCGCTTCAA AAGTGAAGGA ATTTTCTCCA 
GTGGGAGTTG AAGCTCTTCG TAAAACAGCA GCCATTGTTT CCCTGCCCAT TATTGCGATA 
GGAGGCATCA CGATTGAAAA CTCGGCTTCG CTCATCTCCT GCGGAGCATC CGGGGTTGCG 
GTCATTTCGG CAGTCAGCAA GGCTAACGAT CCCTCCAAAG CAGCACATGA ACTCCTTTGC 
GCAATACAGG GGAGAGAAGC ATGA 

 

Protein sequence

MIPSPPFLCV ITDEALCPVT LAEQALKGGA AMIQLRHKTA SGSQLFSWAV EISKRCHQYH 
ALCIINDRVD IALASSADGV HLGQQDMPAS TARKLLGKMA IIGVSASSPD EARLAEQEGA 
DYIGFGHIYP TASKVKEFSP VGVEALRKTA AIVSLPIIAI GGITIENSAS LISCGASGVA 
VISAVSKAND PSKAAHELLC AIQGREA