Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1484 |
Symbol | |
ID | 6463512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1564390 |
End bp | 1565103 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642727711 |
Product | acylneuraminate cytidylyltransferase |
Protein accession | YP_002018351 |
Protein GI | 194336557 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.51038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACGG TAGCAATTAT TCCTGCAAGA GGCGGGTCGA AAGGGCTTAA AGAGAAGAAT ATTTATCCTG TGGCAGGAAA ACCACTGCTT GCATGGACCA TTTTGCAGGC ATCAGCCTCG ACAAGTGTTG AAAAGGTTTT TGTTACAACT GATGACAAGG CTATTGCTGA TGTAGCACAC GCATACGGAG CAGAGGTGAT TGTGCGTCCG TCGGAACTTG CGGGCGACAA GGCAAGTTCT GAATCGGCCA TTATGCATGC GCTCTCTGTT ATTGAACGGG AGTACAACAT GCCGCTCGAG ATGATTGTAT TTTTACAGGC AACCTCACCC TTGCGCAAAC CTGATGATAT TGATCGGGCA GTAGCACTTT TTTGTCAGGA AGGGGCCGAT TCGCTGATTT CGGTCACCAG AGCTGATGAT CTTACCCTGT GGGAATCAAG GGCGGGAAAA TGGGAAAGTG TCAATTTCGA TTACCGCAAT CGAGGTATGC GACAGGATCG TCCAACACAG TTTATTGAAA ATGGTTCAAT CTATCTTTTC AAGCCGGAGA TTCTTGCCGC CTTTGGCAAC AGAATCGGTA AAAAGCTCTC TGTCTATGAA ATGGAGTTTT GGCAAACATG GGAGATTGAT ACTATCAAGG AAATAGATTT AATTGAATAT TACCTGTATA AAAAAAACCT GGCAGGCCGG GATGTAGCTC CACAGAACTA TTAG
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Protein sequence | MHTVAIIPAR GGSKGLKEKN IYPVAGKPLL AWTILQASAS TSVEKVFVTT DDKAIADVAH AYGAEVIVRP SELAGDKASS ESAIMHALSV IEREYNMPLE MIVFLQATSP LRKPDDIDRA VALFCQEGAD SLISVTRADD LTLWESRAGK WESVNFDYRN RGMRQDRPTQ FIENGSIYLF KPEILAAFGN RIGKKLSVYE MEFWQTWEID TIKEIDLIEY YLYKKNLAGR DVAPQNY
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