Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1463 |
Symbol | |
ID | 6463543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1541377 |
End bp | 1543284 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642727692 |
Product | hypothetical protein |
Protein accession | YP_002018333 |
Protein GI | 194336539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGTT TTATTACAAA CCGTGAGTGC AGATATGATG GGCCAAATTA TGAAACGAAT GAAATCTTTA TGATATCCCC ATTTGGTTTT CCATATGATG ATTTGTACTC ATATGCGATT GCACCAAATG TTAAAAATAA AATGAAAGGG TATAAGATTT CACGAGCAGA TCAATCTTTG CAACTTGGAT ATGTAATGTG CGAAAGAATT TGCAGAAGAA TTCTTCGTTC ATCATTTATT TTGGTGGATT TAACTTTGCC AAATGGTAAT GTTTATTATG AATTAGGGCT ATCTTATGGC CTTTGCAAGT CAATAGGAAT TCTTCAAAAA AAATCAGCTG ACAATCCTTA TATTAAGGCG TTTTTATCTT CGCCTGGTAG CGCAATAATC CATGAATACA ATAAGCTTGA GAACCTTCTT AACTCTGATA TTTTATTAGA AAGCAAGAAG GAGCCCTATA TTCTATCATC TGAAACACGT AATTCTTTGC AGATAGAGCT ACAAAAATTA ATTAATGATG ATCCACCTGT TATCCTCAAT ATTGTAAATA ATGACGGCCC GGTTTTAGAT TTGCATGAGA TCGCAATTAA AAACGCTCTT AATGTGAAAA AAAATAAAAA TAATGAGGTT GAAGGGGTAG TCGATGTCCT TGAAACACTT GAGAGATGGA CTGTTGATAC TATCATAGTT GATCAGGATT TGGATATTCA AAATGCTTTC AAAAAAATTA TTGCCGCCAA AATATGTGTA TTTGATATGA CTCACTATCG TGACCCTGTA AATGCTTACA TGTTTTTCCT ACTTGGTCTT GCTCACGCAC TTGAGAGAGA GGCTATTCCT GTCATCAATC GGCCTATGAA TTTGAGTGTT CCTTTTGACA TCAGGGGCCT ATGGCAGGTG AATTTTGACA AGATTGAGGA TCTCACAAAA GAACTGAGTC AAATAGTTGC CATTATTGAC GCTGACGTCA AAAAAGAACA GAAAAATCGT CTTTACAAAG ACATATGGGA TCCATTTTTG AAAGAGAAAA AATTGAGCGT TTACACTTGT GCACGGGAAG TTTCCCATGA TGAAAATCGC GGAAAGCGAA CTAACATCGA CAAATGGGAC TTTATCACCG TGTCAGATCT ATCTTTTTTT ATCGCGCAAA TGTATGAGAC TGCGGAGGTT AATGTAGAAA AACCGAAAAA CAAAAAAAAG GCTTCCGAAC TCACTGATCA GAATGAATTA ACTGATTTTC ACAAACAGAT CCGCGAAGAA ATCCATGACA GAAACTGTGT TATCGTTGGT TCCCCGGATG TGAGTGATTA TGCAGAAGTT ATTCTATCTG ATCTTCATGG TATCATGCCT CACTCCCAAG GCCAAAAAAG AGATAATTTA CCTTTTATAT TTTATAAAAG AACACAAGGA ACTGATCACC CAAGGAAAAA TAGTTCTTTC TATTTAGAAC CTGAAAGTAC TCAGAAAGAT AGGGTCGAAT TTGGCCCAAA CGGACGGACA AGAGTGGAAT GCGATGAATA TGCAAATGAT CAAGATGGAG TAAAATGCAA TCATGGACAA ACTTGTATCG TCATAACCAT TGCAAAGAAC CCTCATCAAT CAGCAAATGG CGAACAAAGA CAAGTTATGA TACTCTCAGG ATTTACAGGT GTTGGAACCT ATGGGGCAAT TAAGTTTCTC ACCGATCCGA CTAACCAGTA TAATAGAGAA CTAATAAAGT TCTTCAAACA CGAAAACAAA AATAAATTAC CTTTTCCAAA TAATAATATC CTTGGCGTAC ATTTACTTCT TGCTGTTGAA TACGATTGCC TTGATGATGG GTCAAGTGGT GATACTCGAG AACCAACATC TATTACATTG AAAGGGGTTG AAAAGATTTT TCAAAAATGC GACCAATCTT GTGGATAA
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Protein sequence | MKCFITNREC RYDGPNYETN EIFMISPFGF PYDDLYSYAI APNVKNKMKG YKISRADQSL QLGYVMCERI CRRILRSSFI LVDLTLPNGN VYYELGLSYG LCKSIGILQK KSADNPYIKA FLSSPGSAII HEYNKLENLL NSDILLESKK EPYILSSETR NSLQIELQKL INDDPPVILN IVNNDGPVLD LHEIAIKNAL NVKKNKNNEV EGVVDVLETL ERWTVDTIIV DQDLDIQNAF KKIIAAKICV FDMTHYRDPV NAYMFFLLGL AHALEREAIP VINRPMNLSV PFDIRGLWQV NFDKIEDLTK ELSQIVAIID ADVKKEQKNR LYKDIWDPFL KEKKLSVYTC AREVSHDENR GKRTNIDKWD FITVSDLSFF IAQMYETAEV NVEKPKNKKK ASELTDQNEL TDFHKQIREE IHDRNCVIVG SPDVSDYAEV ILSDLHGIMP HSQGQKRDNL PFIFYKRTQG TDHPRKNSSF YLEPESTQKD RVEFGPNGRT RVECDEYAND QDGVKCNHGQ TCIVITIAKN PHQSANGEQR QVMILSGFTG VGTYGAIKFL TDPTNQYNRE LIKFFKHENK NKLPFPNNNI LGVHLLLAVE YDCLDDGSSG DTREPTSITL KGVEKIFQKC DQSCG
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