Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1462 |
Symbol | |
ID | 6463544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1538375 |
End bp | 1541128 |
Gene Length | 2754 bp |
Protein Length | 917 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642727691 |
Product | hypothetical protein |
Protein accession | YP_002018332 |
Protein GI | 194336538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTCT TCATGCAGCA AAACAAGAAC GCATTATTGG TTATCGTTAC TGGTGATGTT ACAATGGACT GGAACATTGC ACGCCACGCA CATCCATCGC AGGAAGCAAC CGAATGGACT GGTGAGGCGA GGAGCAACTT GAACTGGCAG TATGGCAGCG CTGCTCTGCT TGCTGAACTC ATCACAACTA TGACGAAACA ATTGGAGAGT GATCTTCCGT ATACTGTTAA GGTGATAAGC CCCGATACAC CTGCGCAAGC CTCTTTTACC CTTTTCAACA CTTGCTATGT CCATAGCTAT GCAGTCTGGG CTCAATACCG CGATAAAGTG CCCGAGAAAA CTGAACGGAG TGAACCTCAC TGGCGGGTTG AGCGCTTTCT CGGTCTTGAC CTGCCCTCCG AGGGAGTTGC AGAACATCGG GGCAATCCTG TACCGAAGCG ATCTGCAAAC GCTGATATTA TTGTCATCGA CGACAGCAAC CTTGGCTTCA GGAATAACAA GGCGAATTGG CCTGAAGCAA TCAGTGAGCC TGCTCATAAT GTAAATGCTC CATGGATTAT TGTAAAGATG TCCTCGCCTG TAGCAAAAGG AGATTTATGG AGCCATCTTG TTGCCAAAGT GTCTGATCGC CTTGTCGCTG TCTTGACTAT TGATGATTTA CGGCAATCCA AAATTCAGGT AAGTGCCCGG ATTTCATGGG AAAAAACTGC ACAGGAACTC AACTGGGAGC TGACCCATAA CCCGGAGGTG AACGGCCTGA CCAATGCAGC GTACTGTATC GTCTCATTTG GCACAACCGG GGCGTTACTC ATACCGGGGC GCCACAACTC CGGGAAGAAA CCAACACTTC TCTTTGATCC GCTTTTCATG GAGGGTGAAT GGGCGCCCGG AAAAGGGATG ATGATCGGCA AAACATCGAC TCTGGTAGCA AGCATCGTTT TCCAGATCCT GCTCAATCGT GATGCTCCTG ACTTTAAACA AGGAGTCCAG TGCGGCGTAA CCGCGATGCG ACACTTGCAA ACGGTCGGAT ATGATGGTGG AACAGAACCG GTAACCCGCC TGCAATTCCC TACTGAAGGT GTCATTTCAA CTCTAAAAAA CGCTGAAATA CCACTGGCTG AGGCTGAACT GCAAGCAAGC ACGGTGAAGA ATTCATCTCA ACGACTACAC TGGACCATCC TTGCCGCAAG CTCTCACGAC AGCCTTGAGT CGTTAAGTGA AACGATTGTT CTTCAAGGAA CAAAAAATAC CTTAAAAAAT GTGCCGATTG GAAAATTCGG AAAACTTGTA ACGGTAGATC GTCAGGAGAT AGAGTCACTG AGAAGCATTC AGAGTCTGAT CGGTGAATAT TGCACACAGA AAAAAGAACG ACCTCTTTCA ATTGCCGTTT TTGGCCCTCC CGGTTCTGGC AAATCATTTG CCGTTGAGCA AATCGCCTTA GTTGCGAATC CGGAAAAAAT CGCAGAAAAA ACCCTGACCT TTAATCTCTC CCAATTCAAT GACCCGGACG AGCTGATCAA CGCTTTTCAC CAGATTCGTG ATATCGGATT ATCCGGAAAA ATACCGCTGG TATTCTGGGA TGAGTTCGAT TCGACGCTTG AAAATAAAAA ACTCGGCTGG CTACGCTTCT TTTTAGCACC GATGCAGGAT GGAAAATTTC AGGAAGGCCA AATCACCCAC CCTATTGGCA AAGCTATTTT TGTTTTTGCA GGCGGTACTT TTCCCAACGT TGATTCCTTT ATGAACCTGC TATCTGAAGA AGATCTTACA CAAGATCTTG CAAATAAGTT GGCAAATAAA AAAGCTTCTC CATTAGATAA AAAAACTATT GAAGAAGCAA AAAAAATAGC AAAAAAGCTT ATAAAAAAGA TTTCAGATGC AAAAGTCCCG GACTTTATCA GCCGACTGAA AGGGTTCCTC AATGTGCTCG GTCCGAACCC GCAAGAAGAT AATAAACAAA ACGACCCATT TTATATTGTT CGCCGTGCTC TTTTGCTACG CTCAATATTC GAGAGGGAAA CACCACAATT ACTTGATAAA GACCATCAAC TGCGAATTGA TACCGGAATC CTCCGTGGTT TTCTCCAGAT AAACAAATAC CTCCATGGAG CCCGATCCAT GGAATCGATT GTTGCAATGA GCCGTCTGGG GAATAGATCC CATTTCAGCC GGTCAAACCT TCCTCCTGAA AAACAGCTCA GATTACATGT CGATCCGGTA AAATTTATTG AACTGTTACA CAAACTGAAA CTCGAAGGTG ATCTTCTTGA AACATTGGCC AAACTGAATC ACCTGTTATT TTGCAAAAAT CTGAGAAAGG AAAAATATGT TTTAGGTAAA ATTACCGACG AGAAAACAGA ACCAAAGACC CACAGCTCAC TGAAGCCTTA TGCTTGCCTG CCAGCACACG AAAAAGAACA GAATCGCAGA GCTGTGCGCG ACATTCCAAA CAAACTTGAA CGTTTTGGTT ATGCCATGGC TCCTGGACGC AACAACGAAG CTGATATTGT GTTTCCAACT GATATTCTGG AAAAGATGGC CGAGCTGGAA CATGAACGGT GGGTTAAAGC AAATATGGAT GAAAATTGGG AACATGCCTT CATAACCGAC AAGGATAACA AGCTCCATAC ATTGCTTGTT AAATGGGATG AATTAAGTAA GGACGAAAAA GACAAAGACA GACGGCTCAT TTCAGAAAGC ATTCCCTACA TGCTGAGAAA AGCTGGGTAT ACTATTGTAA AACTTTCAGT GTAA
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Protein sequence | MPLFMQQNKN ALLVIVTGDV TMDWNIARHA HPSQEATEWT GEARSNLNWQ YGSAALLAEL ITTMTKQLES DLPYTVKVIS PDTPAQASFT LFNTCYVHSY AVWAQYRDKV PEKTERSEPH WRVERFLGLD LPSEGVAEHR GNPVPKRSAN ADIIVIDDSN LGFRNNKANW PEAISEPAHN VNAPWIIVKM SSPVAKGDLW SHLVAKVSDR LVAVLTIDDL RQSKIQVSAR ISWEKTAQEL NWELTHNPEV NGLTNAAYCI VSFGTTGALL IPGRHNSGKK PTLLFDPLFM EGEWAPGKGM MIGKTSTLVA SIVFQILLNR DAPDFKQGVQ CGVTAMRHLQ TVGYDGGTEP VTRLQFPTEG VISTLKNAEI PLAEAELQAS TVKNSSQRLH WTILAASSHD SLESLSETIV LQGTKNTLKN VPIGKFGKLV TVDRQEIESL RSIQSLIGEY CTQKKERPLS IAVFGPPGSG KSFAVEQIAL VANPEKIAEK TLTFNLSQFN DPDELINAFH QIRDIGLSGK IPLVFWDEFD STLENKKLGW LRFFLAPMQD GKFQEGQITH PIGKAIFVFA GGTFPNVDSF MNLLSEEDLT QDLANKLANK KASPLDKKTI EEAKKIAKKL IKKISDAKVP DFISRLKGFL NVLGPNPQED NKQNDPFYIV RRALLLRSIF ERETPQLLDK DHQLRIDTGI LRGFLQINKY LHGARSMESI VAMSRLGNRS HFSRSNLPPE KQLRLHVDPV KFIELLHKLK LEGDLLETLA KLNHLLFCKN LRKEKYVLGK ITDEKTEPKT HSSLKPYACL PAHEKEQNRR AVRDIPNKLE RFGYAMAPGR NNEADIVFPT DILEKMAELE HERWVKANMD ENWEHAFITD KDNKLHTLLV KWDELSKDEK DKDRRLISES IPYMLRKAGY TIVKLSV
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