| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1434 |
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| Symbol | |
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| ID | 6461371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1508171 |
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| End bp | 1511377 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642727667 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_002018308 |
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| Protein GI | 194336514 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.686584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTTA ACCTTTACAC CAGCAACCGG ATGGAAGTTC TGGTTGATAC CCTTGCCGCT
GCTCTTCGCG AGCCGCTGGC TTCACCGTTC AAGCAGGAGG TGATTGTGGT ACAGAGCCGG
GGGATGCAGC GGTGGCTCTC CATGGAGCTG GCGTCGCGGT TCGGCGTCTG GGCTAACGGG
CACTATCCCT TTCCGAATGC GATGGTGAAG GAGCTGTTCG GGGCGCTCTT TTCTGAAAAG
CCTGACACTT CATCATTTGC TCCGGAGGTG ATGAGCTGGA GGATCATGCG GCTTTTGCCT
GAGCTGCTCG ACACAGAGCC CTTCGGCACC TTGCGTCGCT ATCTTGCTGA TGATCCTGAC
GGGCTCAAGC TCTTTCAGTT GTCGGAAAAA ATTGCTGATA CCTTCGACCA GTACACGCTC
TTCCGTCCGG AGATGCTCTC CCATTGGGAG GCGGGGGAGT CACAACCTGC CGGCGAAGAG
TGGCAGCCGG TTCTCTGGCG GAAGCTTGCT GACGGGGAGG GAATGCATCG GGGAAGGATG
AAGGAGCTTT TCTGCAGGCA GTTGAGCCCT CTGTCGCCAG AGGTGAAGGA GATTCCCGAG
AGGATCACCC TTTTCGGCAT CTCCTACCTG CCAAAGTTCC ATCTCGATAT GCTCTCGGCG
GTTGCGAGGG TGACTGAGGT GAACCTCATT CTTCTGAGCC CGACTCGTGA GTACTGGGGC
GATATTCTCG CCAGGAAGGC GATTGTCAGG CTGCCGGAGG AGGAGCGGGC CCTGCGCATG
GAGGGGAATC CGCTTCTCGC TTCGCTTGGC AGGATCGGAC GGGATTTTTC GGATATGATT
ATCGACATGA GCGACAGCGC TTTTCATCAG GAGGAGCGCT ATGATGATCC GGGTGAGGAG
TGCCTGCTTC ACGGCCTGCA GTCCGATATT CTGAACCTTT CGGGTACCGG TGAGGAGGGG
GAGCAGCGCC CGCTTGACCC GCTTGACCGG TCGCTCCGGA TTCACTCCTG CCACAGTCCG
CTTCGTGAAA TCGAGGTGCT CTACGACAAT ATTCTTGCCA TGCTTGAGGA GTCTCCCGGC
CTGACTTTGC GCGATATTGT GGTGATGACG CCGGATATTG AGAGCTATTC GCCCTACATC
TCCACCGTGT TCGGAGCAGG AGGGAATGGC GCCGGATTGC ACTACTCCAT TGCCGACCGG
AGGATGATGC ATGAGGGGGA GATTGCTTCG GCGGTGCTGA AACTGCTTGC TCTGCCTGCA
AGCCGCCTTG CCGCATCCGA ACTCTTTGAC CTGCTTGCCT CTCCGCCCGT AAGCCGCCGT
TTTTTGGTGG AGAGTGACGA ACTTGACGTT ATCCGTGAGT GGATTGAAAA AACCGGGATT
CGGTGGGGGA TGGATGAGGG CGACCGTACG GCGAAGGCTC TTCCTTCCTA TCGCGAGAAC
TCATGGAAGG CAGGGCTTGA CCGGCTCCTG CTCGGCTATG CCATGCCGGA CGAGAATCAG
CTTTTCAACG GCATTCTGCC CTACGATGAT CTGGCTGGTT CTGCAGCCGA AACCCTCGGC
AAGTTTGCCG GGTTCATCAC GTCGGTTGAA GCGTTTGTCA ACAGGATGGA ACGGCCCTGC
ACCCTTGAGG AGTGGCGCAG CCGGTTTCAG GCGCTGCTGG CCGACTTTAT TCTCCCTTCC
AGCGTCTCCG AGCGGGAGTT TGCAACCATT GCCGCTCTTG GCGAAAAGCT TGGTGAGGTT
GCCGCTGCGG CGGAGTTCAC CCAGGAAGTG ACGCCTGCGG TGATGCTCTC CTGGCTGAGG
GCTCACCTTG AGCTGCAGGA GCAGGGGCTG GGCTTCATGA CGGGTGGCAT CACCTTTTGC
GCCATGCTGC CCATGCGGAG CATTCCCTTC CGTGTTGTCG TTTTGATCGG CATGAACGAC
AGCGCCTTTC CCCGCCAGAG CCGCGCTCCG GGATTTGACC TCATTGCGCG TGAGCCGCAG
AAGGGCGACC GCTCATTGCG TAATGAAGAC CGTTACCTCT TTCTTGAGTC GATCCTTTCG
GCCCGTGACC TGCTCTATAT AAGCTATATC GGCCAGAGCA TCAGGGATAA CAGCGAGCTG
CCGCCCTCGG TGCTGGTCAG TGAACTGCTC GATGCCGTTC GCCGGGGCTT TTCCCTGCCC
GATGGAGATT CCGTCGAGAA GCAACTGGTG GTACGGCACC CTTTGCAGGC TTTTAACCGG
GCCTATTACT CTGCAGGCTC TCCGCTTTTC AGCTATTCGG CTGAGAACTT TCATGCGCTG
GTTGAAAAAG AGCGTCCTGC AGCTCCGTCA CGCCCCTTTA TGAGTGTTCC TCTTGATGAA
CCGCCTGAGG AGTGGAAAAC CGTTTCGCTT AAACAGCTTC TGCGTTTTTA CGATAACCCG
GCGGGCTTTT TTCTGGAGCA GCGTCTTGGT ATCAGGCTTG AAGGGATGGT GGAGCCGCTT
GAGGATCGTG AACCCTTCGC AGTTGAGGGG CTCGCATTGT ACAGTCTGAA GCAGGAGCTG
CTTGAAATTG TGCTTGGAGG AGGGAATACA CTCGAACTGC TCCCACTCTA TCGGAGCCGG
GGAGTGCTCC CGCCCGCCCT CCATGGTGAG CTGCTTTTCC GTAAAATTCT TGATGAGGTG
CAGCAGTTTG CCGCAACCGT GCAGGAAAAA ACCGCTGGCG CTGGCGCTCT GGCACCGCTT
GAGGTCGATC TGCAGCTTGG CGGATTCCGC CTGACCGGTC AGCTTGTACG GGTGTGGCCA
GAGAGCCTGT TGCACTACCG CTGCGCGAAA CTGAAGATGA AGGATCAGAT GCGAGGCTGG
ATTGAGCATC TCGTGCTCAA TATGGCAGAT CAGCCGGGTT ATCCAAGAAA AACCTCTCTT
GTCATGGTTG ATAATGAAAA ACAGTTTGCT CCGGTGGCTG ATGCTGCCCT GTATCTGGAG
GATCTTCTGA AGTATTACTG GCAGGGGCTC TCCATGCCGC TGCGCTTTTT CCCGCGTTCT
TCACTGGCCT TTGCCGCAAA AGAGGATCTC GATGCCGCCC GCAGGGAGTG GCGTGACGAC
ACCTTCAACA ACCGCCCGGG CGAGGGCTCC GATCCGGCAA TCGAGCGCTG CTTTGGCGCC
GCAGATCCCT TTGACGATGA GTTCTGCTCC CTTGCCGTCG AGTTGCTCAG GCCGATGATT
CAGGCTGCAG GGGAGGAGGC ACCATGA
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| Protein sequence | MPLNLYTSNR MEVLVDTLAA ALREPLASPF KQEVIVVQSR GMQRWLSMEL ASRFGVWANG
HYPFPNAMVK ELFGALFSEK PDTSSFAPEV MSWRIMRLLP ELLDTEPFGT LRRYLADDPD
GLKLFQLSEK IADTFDQYTL FRPEMLSHWE AGESQPAGEE WQPVLWRKLA DGEGMHRGRM
KELFCRQLSP LSPEVKEIPE RITLFGISYL PKFHLDMLSA VARVTEVNLI LLSPTREYWG
DILARKAIVR LPEEERALRM EGNPLLASLG RIGRDFSDMI IDMSDSAFHQ EERYDDPGEE
CLLHGLQSDI LNLSGTGEEG EQRPLDPLDR SLRIHSCHSP LREIEVLYDN ILAMLEESPG
LTLRDIVVMT PDIESYSPYI STVFGAGGNG AGLHYSIADR RMMHEGEIAS AVLKLLALPA
SRLAASELFD LLASPPVSRR FLVESDELDV IREWIEKTGI RWGMDEGDRT AKALPSYREN
SWKAGLDRLL LGYAMPDENQ LFNGILPYDD LAGSAAETLG KFAGFITSVE AFVNRMERPC
TLEEWRSRFQ ALLADFILPS SVSEREFATI AALGEKLGEV AAAAEFTQEV TPAVMLSWLR
AHLELQEQGL GFMTGGITFC AMLPMRSIPF RVVVLIGMND SAFPRQSRAP GFDLIAREPQ
KGDRSLRNED RYLFLESILS ARDLLYISYI GQSIRDNSEL PPSVLVSELL DAVRRGFSLP
DGDSVEKQLV VRHPLQAFNR AYYSAGSPLF SYSAENFHAL VEKERPAAPS RPFMSVPLDE
PPEEWKTVSL KQLLRFYDNP AGFFLEQRLG IRLEGMVEPL EDREPFAVEG LALYSLKQEL
LEIVLGGGNT LELLPLYRSR GVLPPALHGE LLFRKILDEV QQFAATVQEK TAGAGALAPL
EVDLQLGGFR LTGQLVRVWP ESLLHYRCAK LKMKDQMRGW IEHLVLNMAD QPGYPRKTSL
VMVDNEKQFA PVADAALYLE DLLKYYWQGL SMPLRFFPRS SLAFAAKEDL DAARREWRDD
TFNNRPGEGS DPAIERCFGA ADPFDDEFCS LAVELLRPMI QAAGEEAP
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