| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1350 |
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| Symbol | |
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| ID | 6462506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1412952 |
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| End bp | 1415051 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642727590 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002018231 |
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| Protein GI | 194336437 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTGG ACGGTGACAA AAAAAAAACA GACACATGCT CTTTCGAAGA GGAGCGGATT
GGAGTTCGTG AACGAGCTTT TACTAAAGCC ATGGTTGAGA GTCTCCCTGG ATCATTTTCT
ATTAATGATG CTCATGGACG ACTTGTCTGG TGGAACGCCT ATCATCGTGA TGAAATTGTT
GGAAAAGATG AAAGCGAAAT GTCTGAGACC AATGCAATGG AGGTCTTTCA TCCCGATGAC
CGGGCCTTTG CATTGGAGAA AATGCTGAAT GTGCTGAATT TCGGTATTGA AGAGACCTCT
GAAGGAAGAG TCATGTTGCG TGGAGGACCG AAATTTCAAT GGAGAATGAT CACGGGCAAG
AGAATTATCA TTGAAGATCA TCCGTTCGTT GTGGCTGTTG GTATTGATAT TACTGAACGC
AAGCGGTTTG AAGCCATTAT GGCATTGCGA CTGCGTCTTC TTGAAATGGC GGAGCATTCT
ACTGCCGAGG AGTTGCTGAG AGCGACACTC GATGAAGCTG AACGCCTTAC GGAGAGCGTA
ATCGGTTTTT TCAATGTTAT TACTGAGGAT CAGAAAACAT TTTCAATACG GGTATCATCA
TTATTCCGTC AAATCAAGAC GCAACTACCG GAAGGGGAAG AAAACGCTAT CGCCCTGGAT
GAAGAGGAGA TATTGACCGA TGCGATACGG GAACGTCGCA GCGTTATTGA TAATAATTAC
ACCGGATCGC TCAACTGCTT TTCTGCGCAA GAGCCCCATG CCAGTTTCAA ACGAATACTT
ATTATTCCCC TGATGCGAGG GGCAACGGTT ACTGCACTTC TTTGTGTTGG AGGCAAGTCT
TACGATTATG ATGACGATGA TGCAAGAACG GTGGGTGTAC TGGCCAATCT TGCATGGGAT
ATTGTCTCTC GTAAACGTGC CGAGTTATCA GAAAAGAAAA TACAAGAGGT GCTTTTGCAG
GCTCAAAAGA TGGAATTGCT TGGTCAGCTT GCCGGAGGTA TCGCCCACGA TTTCAATAAC
ATGCTGGGGA TAATTCTCGG TAATGCAGAA ACGGCTATGA AGAGAGAGGT CATTGAAGAG
CCTCTTCTGG GTAATATGAA AGCTATTCTT AAAGCTTCCG AACACTCAGC AGATCTTTGC
AATCAACTTC TTGCATTCTC CCGGAAGCAG GCCGTGATGC CTATCGTTCT TGATCTGAAC
AGCATGGTTG AAAGGATGCT TACGGTACTC AGGCGACTGA TGGGCGAAAA TATCTCCCTG
CTCTGGATAC CTGAACGTCG CAGTACCCCG GTCAAGATTG ATCCTGCACA AATGGAGCTT
ATTCTTGGCA ACCTGTGTGT CAATTCTCGT GACGCTATCC ATGATATAGG TGCAATTACG
ATCAAAACAT GCAGGATTCA TGTTGATAAA TCCGAATCCA CTGCCGCTCA TCCCTGTTGT
AAGGAGTCTG GTGATTATGT GATGCTCAGT GTGATCGATA ACGGCTGTGG TATCAATAAA
AAGGATCTTC CACATATTTT CGAACCCTTC TTCACGACAA AGGAGAGAAG AAAAGGTGCA
GGAATGGGTC TTTCAACAAT CTATGGTATT GTCAAACAGA ACCATGCCGC TATCGAATGC
CAGAGCGAAC AGGGCAGGGG AACCACCTTC AACATTTATC TGCCACAGCA TATCGGTTAT
GCAGATCAGG AGGAGAGTGA GCAATCGATT GTATCGGCTG GTGGAAGAAA AGAGATGATA
CTGCTTGTAG AGGACGAGCC TGATATCCTT AATATCTATA AGCTGATGCT CGAAAATAAT
GGCTATACCG TACTTGATGC TGCGGCTCCG AGTGATGCTC TGCGGATTGC CAGTGAGTAC
AAAGGGCAAA TTCACCTCTT GATAACCGAC GTCGTCCTGC CTGAAATGAA CGGTTGTGAC
CTCTCAAAAA AGTTGGAATC ACTTTTCCCG AAGCTGAAAA CCCTTTTTAT GTCTGGTTAC
ACCACAGACT CCATTAACAA ACAAGTGGGG GGAGAGTTGG GAGTGAATTT CATTCAGAAG
CCATTTTCTA TTGATGCGCT CATCAGCGCA ATCAATAAAA TTTTTACACT TCCTGGATGA
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| Protein sequence | MTVDGDKKKT DTCSFEEERI GVRERAFTKA MVESLPGSFS INDAHGRLVW WNAYHRDEIV
GKDESEMSET NAMEVFHPDD RAFALEKMLN VLNFGIEETS EGRVMLRGGP KFQWRMITGK
RIIIEDHPFV VAVGIDITER KRFEAIMALR LRLLEMAEHS TAEELLRATL DEAERLTESV
IGFFNVITED QKTFSIRVSS LFRQIKTQLP EGEENAIALD EEEILTDAIR ERRSVIDNNY
TGSLNCFSAQ EPHASFKRIL IIPLMRGATV TALLCVGGKS YDYDDDDART VGVLANLAWD
IVSRKRAELS EKKIQEVLLQ AQKMELLGQL AGGIAHDFNN MLGIILGNAE TAMKREVIEE
PLLGNMKAIL KASEHSADLC NQLLAFSRKQ AVMPIVLDLN SMVERMLTVL RRLMGENISL
LWIPERRSTP VKIDPAQMEL ILGNLCVNSR DAIHDIGAIT IKTCRIHVDK SESTAAHPCC
KESGDYVMLS VIDNGCGINK KDLPHIFEPF FTTKERRKGA GMGLSTIYGI VKQNHAAIEC
QSEQGRGTTF NIYLPQHIGY ADQEESEQSI VSAGGRKEMI LLVEDEPDIL NIYKLMLENN
GYTVLDAAAP SDALRIASEY KGQIHLLITD VVLPEMNGCD LSKKLESLFP KLKTLFMSGY
TTDSINKQVG GELGVNFIQK PFSIDALISA INKIFTLPG
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