Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1294 |
Symbol | cobT |
ID | 6463680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1353642 |
End bp | 1354706 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642727535 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_002018176 |
Protein GI | 194336382 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAA AGTTGCAGTT ATTGCTGGAT CGAATTAAAC CTGCCTCCCG GTCGCTGAGT GATGCGGCCC GAGCCCATCT TGATGATTTG ACCAAACCGC AGGGGAGTCT TGGCCGTTTG GAGGAGATTG CTCTTAAATA TGTTCTGGCG ACCGGCAACC TGAGCCCGTT GCTTTCAAAA AAGAAAATCT GCTGTTTTGC CGCCGATCAT GGTGTGGCGG CTGAAGGGGT TTCGGCTTTT CCGGCAGAGG TGACTCCTCA GATGGTTTAT AACATGCTCG GTGGCGGAGC GGCCATTAAT GTGCTGACGC GTCATGCGGG TGTTGACCTC GATGTGGTGG ATATGGGTGT GAACCATGAT TTTCCTGATC TGGCAGGGCT CGTCAAAAGA AAGGTGCAGC CGGGAAGCGC CAATATGGCT ACCGGCCCCG CCATGAGTGA GGAGGATGCC CTGCAGGCTC TGCTTTGCGG TGCTGAACTG GCGGCTGAAG CCCAGGAGGC GGGCTACCAT CTCCTTGGAA CCGGTGAGAT GGGGATTGCC AATACCACTC CGGCAACGGC GCTCTATGCT GTTTTGCTTG ATGTATCGGT TGAGAGCATT ACAGGAAGGG GCACCGGTAT TGATGATGAG CGCCTGCTCC ACAAGATTGC TGTTATCAAA CAGGCGATTG CCGTTAATGG CTCCCGCTGC ACCACGCCGT TCGCGACGCT TGCCGCGCTT GGTGGTTACG AAATTGCGGC CATTGCCGGA TTCATTCTTG GCGCAGCCGC AGCCCGCACT CCTGTGGTTG TTGATGGCTT TATCTCTTCT GCAGGAGCGG TGGTGGCGCT CAAACTCTGC CCGGCAGTTG AAGACTATCT TTTTTTCAGC CATCTCTCCA ATGAACAGGG GCACAGGGCA GTTATGGAGA AGCTTGGCGC CCGGCCGATT CTTGATCTTG ATCTTCGCCT TGGTGAGGGG ACGGGTGCGG CTATTGCTAT GCAGCTTATT GAGGGCGCTG TAAAAATTTA CAATGAGATG GCCACCTTCA GTGCTGCAAG GGTCAGTGAA AAAAGCGGGG AGTAG
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Protein sequence | MPEKLQLLLD RIKPASRSLS DAARAHLDDL TKPQGSLGRL EEIALKYVLA TGNLSPLLSK KKICCFAADH GVAAEGVSAF PAEVTPQMVY NMLGGGAAIN VLTRHAGVDL DVVDMGVNHD FPDLAGLVKR KVQPGSANMA TGPAMSEEDA LQALLCGAEL AAEAQEAGYH LLGTGEMGIA NTTPATALYA VLLDVSVESI TGRGTGIDDE RLLHKIAVIK QAIAVNGSRC TTPFATLAAL GGYEIAAIAG FILGAAAART PVVVDGFISS AGAVVALKLC PAVEDYLFFS HLSNEQGHRA VMEKLGARPI LDLDLRLGEG TGAAIAMQLI EGAVKIYNEM ATFSAARVSE KSGE
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