Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1244 |
Symbol | |
ID | 6463782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1303762 |
End bp | 1304847 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727491 |
Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_002018132 |
Protein GI | 194336338 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.661907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC TAACCGAGCA TTACCAGCAA TTACTGGGAT TTCCTGCCAT CTGGGAGGTC GATGATGTCA ACCTTTCCGT TTCTGGTCTG AAGATAGAAG TTCACCTCCG TTTTGTAGGC GATGAAGTAA TATGCCCTCA ATGTGGGGTG CGCGGGAAAG CCTATGACAA GGCCCCTGAA CAACGTTGGC GGCATCTTGA TACCATGCAG TTTGAAACCA TCATCATAGC ACGCATTCCC CGTTGTCAGT GCGAAACGTG TGGTGTGAAG ACCATAGCAG TCCCTTGGGC GGCCCCCCAT TCCCGTTTTA CCCTCATGTT TGAAGGTTTT GCCGTTGCTC TGCTCCAGCA CTGTTCCAGT GTACAAGCGG CCTCAAATAT ACTCAAGCTT GATTGGCATG CTGTGGATCA GATTATGAAA CGTGCTGTAG AGCGAGGACT TCTACGCCGT GAGCCCGATG ATGTAGTGCA TGTAGGTATG GACGAAAAAA GCTTCAGGTC GGGCCAGAAA TACATCACCA TACTCAATGA TCTTGATAAA AGCCGAGTAC TTGATGTCAT TGAGGATCGG ACACTGACAG CAACGAAAAA GCTGTTAGGA ACCCTTTCAA AACAACAACG AAAGGCAGTT AAGTCGGTAT CGCTGGATAT GTGGCAAGCC TTTGCAACAG CTACACATAA GCTCCTTCCT GCGGCTGATA TTGTTCACGA CCGGTTTCAC ATCAGCAAAT ATCTTAATGA CGCAGTTAAC AAGGTTCGGC ATCAGGAATC ACAGGAACTG AAGAAAGATG GGGATACAAG GTTGGTTGGC TCGAAATACA CCTGGCTTCG AAATCCCGAA AAGATGACCA AGAGCCAAAA AACACGGTTT AACGAGTTGA TAGCATGCGA ATTTAAGACC GGTGTGGCTT GGGTGTTGAA GAATATCTTT CGTGATTTCT GGAACTGCTC ATCAGGACTG AGGGGCGAGA TATTTTTCGC GTACTGGTGT GAGTTAGTCG ACAAGACAAA ACTGAAGCCA CTGATAAAAG TGAAAGATAT GATGGAACGT CATAAAGGGA ACATTCTCAA TTACTGTGCG CTGTAG
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Protein sequence | MQKLTEHYQQ LLGFPAIWEV DDVNLSVSGL KIEVHLRFVG DEVICPQCGV RGKAYDKAPE QRWRHLDTMQ FETIIIARIP RCQCETCGVK TIAVPWAAPH SRFTLMFEGF AVALLQHCSS VQAASNILKL DWHAVDQIMK RAVERGLLRR EPDDVVHVGM DEKSFRSGQK YITILNDLDK SRVLDVIEDR TLTATKKLLG TLSKQQRKAV KSVSLDMWQA FATATHKLLP AADIVHDRFH ISKYLNDAVN KVRHQESQEL KKDGDTRLVG SKYTWLRNPE KMTKSQKTRF NELIACEFKT GVAWVLKNIF RDFWNCSSGL RGEIFFAYWC ELVDKTKLKP LIKVKDMMER HKGNILNYCA L
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