Gene Ppha_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1234 
Symbol 
ID6463493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1293442 
End bp1294239 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID642727482 
Productprotein of unknown function DUF323 
Protein accessionYP_002018123 
Protein GI194336329 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.839191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAC CAACACATAC CGAAATCCTT ACCGGCCTCA GAACTCTCGC GCTCCGTCCT 
TCCGGTGGCG ATCTGCCCCC GGTCGTCATC AACGAACAGG ACGGATCCCC GATGGTACTT
GTCCCCGCAG GCAGTTTCAC CATGGGAGAC GGCCTCGACA AAGAGAGCCC GCAGCACACC
GTCACTCTTG AAGCGTTTTA CATTTCGGTC TACGCCGTCA CCAATCGCCA GTACCGGGCG
TTCGTGCAGG CTACGGGCCA TCGGCCACCC AACATTGGCG CAAGGATAGA CTCGCTTTCG
GTCTGGCACG AAGACGGCTG TCCCGAAGAG TTCGACGACT ACCCGGTCGT GCTCATCAAC
TGGGACGACG CGGATGCCTA CGCCCGGTGG GCAGGATGCC GTTTGCCCAC AGAAGCCGAA
TGGGAAAAGG CCGCACGAGG GCCGGAAGGA TCGATCTACC CTTGGGGAGA CCGGTGGGAC
GAAAACAACT GCCGGCACCG GAACAACCGG GGAGCGGATT CGGTCGCCCC GGTCTACGCC
TATCCCGAAG GCGTATCGGG CTACGGCACC TGGAACCAGA GCGGCAACGT CATGGAGTGG
TGCAGCGTCT GGCACGACGA AACCGATTCT GCAAATACCG ACACCGGTGA AGAATCTCTC
CGCCAGGAAA GGGGCGGCTG CTGGCGCTAT CCCGACAAAT TCGCCTTCCG CTCATCGCAG
CGCTCGTTCG TGGTTTCCAA AGCGGTTAAC GATTTCCGGG GATTTCGGCT GGTGTTACCG
GTGAAGATGG GGGAGTGA
 
Protein sequence
MNTPTHTEIL TGLRTLALRP SGGDLPPVVI NEQDGSPMVL VPAGSFTMGD GLDKESPQHT 
VTLEAFYISV YAVTNRQYRA FVQATGHRPP NIGARIDSLS VWHEDGCPEE FDDYPVVLIN
WDDADAYARW AGCRLPTEAE WEKAARGPEG SIYPWGDRWD ENNCRHRNNR GADSVAPVYA
YPEGVSGYGT WNQSGNVMEW CSVWHDETDS ANTDTGEESL RQERGGCWRY PDKFAFRSSQ
RSFVVSKAVN DFRGFRLVLP VKMGE