| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1215 |
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| Symbol | |
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| ID | 6463496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1270201 |
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| End bp | 1271472 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727463 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002018104 |
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| Protein GI | 194336310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCG CTCCCTTGGT CATTGTCCTC CTGACGGTTT TACTTGACCT TATCGGGTTC
GGTATTGTGC TTCCACTGCT GCCGACCTAT GCCAAGGATC TCGGTGCAAA TCCTGCCATG
ATCGGGTTGA TTGCTGCAAT TTTCTCCATC ATGCAGTTTA TTTTTTCCCC TCTCTGGGGC
AAGCTGAGCG ACAAAATCGG TCGGCGACCG GTCATGTTGA TCAGTATTTT TGTCACCGCT
GTATCCTATC TTGTTTTATC ACAGGCCAGC ACCATTCCCC TCCTTATTTT TGCCCGTGGA
CTCTCGGGTA TTGGGTCGGC CAATATTGCC ACAGCTCAGG CCTATATCAC TGATGTCACC
GACAGTAAAA ATCGTTCGGG AGCGATGGGC ATGATCGGAG CCGCTTTCGG AATAGGCTTT
ATTATTGGCC CGCTGATTGG AGGTGTGCTC AAGCACTATT ACGGTATTCC GATGGTCGGA
TATGTCTCTG CGGCACTGAT CTCTCTCGAC TTTATCCTTG CTATCTTTTT GCTTCCCGAG
TCAAACAGGA ATGCTCAGAA GATGGTGTTC GGCTTTCTGA AAAAGCGAAC ATCCGAGAGC
GCACCCCGTC GATCGGTCTC TCTCTTTCTT GGTGAAAAAG CCACTGAGTA TGTTGATGGA
CTGAAACTGA CTTTCAGTTC ACGCCCCCTT GCCCTGCTGA TGATTGCAAA CTACATCTAT
ACCTTTGCCA TTGTGAATAT GCAGGTTGCA TCCATTTTGC TCTGGAAGGA GTATTTCAGA
GCTACTGACG AGCAGATCGG TTATATCTTT GCCTATGTCG GAGTGTGGTC TGTCATTGTG
CAGGGTGGTC TTATCAGAAA GCTTATCAAG AAGCTGGGTG AGCACAAGCT TTTTCTCTGG
GGCCATTTTT TCACCTTTAT TGGTGTCTTT TTTGTACCGT TCGCACCTCA GAGTTCGCTC
TTTTCAATCG GGCTGGTTAT CCTCTTCTTT TTTGCTATCG GCACCAGTCT GGTTGCGCCT
ATCAACCTTT CCATGATTTC GCTCTACAGC TATAAACAGC AGCAGGGACA GATTCTTGGT
CTTTCACAGT CAGTCAACTC TTTTGCCCGC ATTATGGGGC CTTTCAGCGG CAGTATCCTT
TATGGCATGA ACTTTCATGC GCCCTATATT GTCGCCGGAA TTCTGACTCT CGCTGGGGCA
ATCATTGCAC TCAGCCTCTT CAAGTACAAA ATTGAAGCCC TTGACCCTTC AACTGAAGCT
AACAATGGCT GA
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| Protein sequence | MKRAPLVIVL LTVLLDLIGF GIVLPLLPTY AKDLGANPAM IGLIAAIFSI MQFIFSPLWG
KLSDKIGRRP VMLISIFVTA VSYLVLSQAS TIPLLIFARG LSGIGSANIA TAQAYITDVT
DSKNRSGAMG MIGAAFGIGF IIGPLIGGVL KHYYGIPMVG YVSAALISLD FILAIFLLPE
SNRNAQKMVF GFLKKRTSES APRRSVSLFL GEKATEYVDG LKLTFSSRPL ALLMIANYIY
TFAIVNMQVA SILLWKEYFR ATDEQIGYIF AYVGVWSVIV QGGLIRKLIK KLGEHKLFLW
GHFFTFIGVF FVPFAPQSSL FSIGLVILFF FAIGTSLVAP INLSMISLYS YKQQQGQILG
LSQSVNSFAR IMGPFSGSIL YGMNFHAPYI VAGILTLAGA IIALSLFKYK IEALDPSTEA
NNG
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