| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1201 |
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| Symbol | |
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| ID | 6463632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1253230 |
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| End bp | 1254186 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727449 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_002018090 |
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| Protein GI | 194336296 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.439197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACAG CAGAGAAGAA ACAACCGTCG GTTATTGTTA TTCTTGGACC CACAGCTTCT
GGCAAATCTG CCCTTGCTTT GGCAGTTGCA AAAAAGATCG GAGGTGAAAT CATCTCTGCC
GATTCACGGC AGATTTACCG CGAATTTGAT ATCGGTGCAG CGAAACCTTC GGAGAGTGCG
CTCGGGGAGA TAAGACACCA TTTTGTCAAT GAAAAAAATA TTGGAGAACC CTTCACGGCT
GGTGACTTTG CCACAGAAGC TGCAGAGCGG ATTATCACTC TGCACCGAAG GGGAAAGCGT
GCGGTTGTTG CTGGAGGATC CACACTCTAC CTTGAGGGGC TGATTGAAGG GTTTGCTGAT
CTCCCTCCCG CAAACCCGGA AATAAGAGCA AGACTGCTTG GTGAACTTGA AGAGGAAGGA
AACGAGAAGC TCTATGCAAA GCTGTTCGAA AGAGACCCCG ATCAGGCCGC AACTCTTGAC
CCCACAAAAA GCCAGCGCCT TATCCGAAGT CTTGAAATCA TTGAGATAAC CGGTTTGAGC
GTCACAGAGT TACAGGCAAG GGCAAAAAAG CGACAGCATG GTGACCTCTG CTTTGTCACT
ACAGGGCTTG CAATGGAGCG TGCCACGCTC TATCAGCGTA TCAACCATCG TACTGATAAT
ATGATTGATG CAGGACTCTA CGATGAGGCT AAAGGGCTTT ATCACAAGTA TCACAAACTG
ATTGCCAGTG GAAAAGTATC TTCTCTGCAA TCGGTGGGAT ATCAGGAATT TTTTCAATAC
CTCGATGGAA TGATCTCGTT TGATGATGCT GTTCGACTGA TAAAGCAGCA TACACGCAAT
TATGCAAAAC GGCAGTTGAC TTTTTTTCAC AATCGGCTCA GCGTAAACTG GACAGATGCC
CCATTGAACA GCAAGGAGCT TGACTCGCTG GCTGAACGGC TTTCAAAAGG CCCCTGA
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| Protein sequence | MATAEKKQPS VIVILGPTAS GKSALALAVA KKIGGEIISA DSRQIYREFD IGAAKPSESA
LGEIRHHFVN EKNIGEPFTA GDFATEAAER IITLHRRGKR AVVAGGSTLY LEGLIEGFAD
LPPANPEIRA RLLGELEEEG NEKLYAKLFE RDPDQAATLD PTKSQRLIRS LEIIEITGLS
VTELQARAKK RQHGDLCFVT TGLAMERATL YQRINHRTDN MIDAGLYDEA KGLYHKYHKL
IASGKVSSLQ SVGYQEFFQY LDGMISFDDA VRLIKQHTRN YAKRQLTFFH NRLSVNWTDA
PLNSKELDSL AERLSKGP
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