Gene Ppha_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1198 
Symbol 
ID6463568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1249597 
End bp1250850 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content50% 
IMG OID642727446 
Producthypothetical protein 
Protein accessionYP_002018087 
Protein GI194336293 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTTG AAAACTTGCG TTCCCGACTG TATTCCCTGG CCAGAAAAAA GCGCGTCTCT 
CTGTTTTTTT TCTACGCAGT TGTCTTCGTG CTCTTTTCGT ATTCTGTTTC GGCTGAACCG
TTACTCTGCG GTATCGATCG GCTCGAAGCC TCCGGATTCC AGGAGTTCTC CGGTTTACGG
ATCGGTCTCA TTACCAATGC AGCAAGCATC AACCGGAAAG GGGAGCCGGG CTATGCCATC
ATGCTTCGCA GCGGTGTTAA CCTGAAGTTT CTGATGGCTC CCGAGCATGG TTTTTCAGCG
GATATTGAAG CAGGTAAAAA AGTTGGCAGC AGCGTGGTTT CAGATACGCT TCCGGTTTAT
TCACTCTACG GAGCTTCAAA AAAACCGGAT ATCCGAAAGT TGCAGGAAGT TGATCTGCTT
GTTTTTGATC TTCAGGATGT CGGCACCCGT TGCTATACCT ATATTTCGAC TATGAAGAGT
GCGATGGAAG CGTGTGAAGA GGCTGGCATA GCCTTCATGG TTCTTGATCG TCCCAATCCT
GTTATTCCCC TGCATGCCGA AGGGTTTATG CTGGCGCCCG GATATGAGTC GTTTGTTGGG
GCGGTTGCTG TTCCTTTTCT TCATGCGATG ACGGTAGGCG AGATTGCTCT GTTGCTGAAG
GAGCAATGCT GCAAGAAGCT TGATCTCCGA GTGATTGCGA TGCAGGGGTA CGGGCGGGAC
AAGTTTGCTG ATGAGTATCC GGGATTCAGC TTCAAGAGCC CTTCGCCGAA CATCAGAAGT
ATTGACACGG CAATAGTTTA TCCTGCCACC GTCTTTTTCG AAGCGACAAC CCTCAGTGAA
GGGCGGGGTA CCGATGCCCC TTTCATGCAG TTTGGAGCCC CTTTTATCAA AAGCGGTGAG
CTTGCTGATG CGCTCAAAAG GTACAGCTTG CCGGGAGTTT CGTTCAGTGC CGTCATTTTT
CAGCCCACTT CAGGCAAGTT CAGCGGCGTT CAATGCCAGG GAGTGAAGCT CACGGTGACT
GATCGTAAAA CGTTCACTCC ATTTCGAACA GCAACTGCAC TCTTGCTTGA ACTTCAGCGC
CTCTACCCTG ATAAACTTGC TCTTGATCAG AGAGGTGATT TTTTTGACCG TCTTGCAGGA
ACCCCTCTTT TTCGGAAGAT GATCAAAAAA CAGCTTTCCC TTGAAAGCAT TCTGGAGGAG
AGTCGCTTGC AAGTGGAGCA GTTCAAACCC GCCTCTTATT TGCTCTACCA CTGA
 
Protein sequence
MTLENLRSRL YSLARKKRVS LFFFYAVVFV LFSYSVSAEP LLCGIDRLEA SGFQEFSGLR 
IGLITNAASI NRKGEPGYAI MLRSGVNLKF LMAPEHGFSA DIEAGKKVGS SVVSDTLPVY
SLYGASKKPD IRKLQEVDLL VFDLQDVGTR CYTYISTMKS AMEACEEAGI AFMVLDRPNP
VIPLHAEGFM LAPGYESFVG AVAVPFLHAM TVGEIALLLK EQCCKKLDLR VIAMQGYGRD
KFADEYPGFS FKSPSPNIRS IDTAIVYPAT VFFEATTLSE GRGTDAPFMQ FGAPFIKSGE
LADALKRYSL PGVSFSAVIF QPTSGKFSGV QCQGVKLTVT DRKTFTPFRT ATALLLELQR
LYPDKLALDQ RGDFFDRLAG TPLFRKMIKK QLSLESILEE SRLQVEQFKP ASYLLYH