| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1190 |
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| Symbol | |
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| ID | 6463682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1241593 |
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| End bp | 1242504 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727438 |
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| Product | Transketolase domain protein |
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| Protein accession | YP_002018080 |
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| Protein GI | 194336286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00778844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAG AGTTAAAACT GTATCCTGCT GAAAAGAAAG GTGAGCTTCT TGAGCTTGCT
TCAATTGACG ATCTCAAGGA AATGGCCCGT CAGGTCCGTC GGGACGTTGT CAGAATGCTT
GCTATGGCCA ATTCTGGCCA TACGGGTGGT TCACTCGGCA TGGCCGATGT CTTTACTGCG
CTCTATTTTC GGGTACTTCA GCATAAGCCA CATGAGTTTT GGCAATATCA GGATGGAGAC
ATGGTGTTTC TTTCCAATGG CCATATTGCG CCAGTCTGGT ATAGCGTGCT TGCCCGTTCA
GGTTATTTTC CCCTTGGTGA ACTGAACTCT CTGCGGAAGA TTAACTCTTA TCTTCAAGGT
CATCCAACTT CTGAAGCGAG GCTTCCAGGT ATCAGAATTG CTTCCGGATC TCTTGGACAA
GGCCTTTCAT CTGCAGTTGG CGCTGCTCTC GGTCTTCGTA TTGATGGAAG TGATAATGAT
GTTTTCTGTC TGATGGGGGA TGGTGAGTGC CAGGAAGGAC AGATATGGGA GGCTGCCATG
AGTGCATCTC ATTACAAGCT TGCCAATATC ATTGGTATTG TCGATCACAA CAATTTGCAG
ATTGACGGAG AGGTTACTTC CATCATGAAT GTTGAGCCTT TTGCAGATAA GTGGCGTTCC
TTCGGGTGGG ATGTCTACCA TTGTGATGGT AATGATATGG AAGATGTTGT CTGCACAGTT
GAAAAGATCA AGGCGAGTGA TAATCGCTAC AGGCCTTCAG TAGTTCTTGC TACAACGATC
ATGGGAAAAG GTGTTCACTT TTTTGAGGGG AGTATGCCAG ATAAATCGAA TTGGCATGGA
AAACCTCCAT CGAAAGATGA TGCCGTCAAA GCTCTTGCCA TCCTTGGTGA GACTCGTTTC
GGTGATTTTT AG
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| Protein sequence | MAKELKLYPA EKKGELLELA SIDDLKEMAR QVRRDVVRML AMANSGHTGG SLGMADVFTA
LYFRVLQHKP HEFWQYQDGD MVFLSNGHIA PVWYSVLARS GYFPLGELNS LRKINSYLQG
HPTSEARLPG IRIASGSLGQ GLSSAVGAAL GLRIDGSDND VFCLMGDGEC QEGQIWEAAM
SASHYKLANI IGIVDHNNLQ IDGEVTSIMN VEPFADKWRS FGWDVYHCDG NDMEDVVCTV
EKIKASDNRY RPSVVLATTI MGKGVHFFEG SMPDKSNWHG KPPSKDDAVK ALAILGETRF
GDF
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